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DB status: OK
Last modified: 2024/03/24

Gene Search:

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DBTMEE:0018451

Gene	Sdcbp
Synonyms	MDA-9 Sycl syndecan interacting protein syntenin syntenin-1
Description	syndecan binding protein
Locus	NM_001098227 UCSC: chr4:6292827-6323269(+) OLP: chr4:6292827-6323269(+) NM_016807 UCSC: chr4:6292827-6323269(+) OLP: chr4:6292827-6323269(+)
DB links	Entrez 53378 MGI 1337026 Ensembl ENSMUSG00000028249 Vega OTTMUSG00000004316
Feature	protein-coding
GO_BP	2 Terms Ras protein signal transduction (GO:0007265) positive regulation of phosphorylation (GO:0042327)
GO_MF	13 Terms glycoprotein binding (GO:0001948) frizzled binding (GO:0005109) interleukin-5 receptor binding (GO:0005137) protein binding (GO:0005515) protein C-terminus binding (GO:0008022) growth factor binding (GO:0019838) neurexin family protein binding (GO:0042043) protein homodimerization activity (GO:0042803) syndecan binding (GO:0045545) ephrin receptor binding (GO:0046875) protein heterodimerization activity (GO:0046982) protein N-terminus binding (GO:0047485) cell adhesion molecule binding (GO:0050839)
GO_CC	5 Terms cytoplasm (GO:0005737) plasma membrane (GO:0005886) interleukin-5 receptor complex (GO:0005895) membrane (GO:0016020) extracellular vesicular exosome (GO:0070062)
KEGG
Ver2_FPKM	see  (v2.0)
SPR_Histone_Erkek_5KaroundTSS	N/A
SPR_Histone_Erkek_2KaroundTSS	N/A
SPR_Methy_Kobayashi_5KaroundTSS	N/A
SPR_Methy_Kobayashi_2KaroundTSS	N/A
SOLiD_OocyteTo4C_FPKM_gene_guided	DBTMEE Gene RefSeq Entrez SPR_FPKM Oo_FPKM 1C_FPKM 2C_FPKM 4C_FPKM MEF_FPKM 0018451 (v1.0) Sdcbp NM_001098227,NM_016807 53378 13.9959 24.5394 9.52805 6.66153 43.4063
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided	N/A
SOLiD_Partheno1C_FPKM_gene_guided	DBTMEE Gene RefSeq Entrez Oo_FPKM 1C_FPKM p1C_FPKM 0018451 (v1.0) Sdcbp NM_001098227,NM_016807 53378 14.2842 24.293 17.2126
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided	N/A
SOLiD_Partheno4C_FPKM_gene_guided	DBTMEE Gene RefSeq Entrez 2C_FPKM 4C_FPKM p4C_FPKM 0018451 (v1.0) Sdcbp NM_001098227,NM_016807 53378 8.82149 6.43197 5.70248
Illumina_Oo_2C_FPKM_gene_guided	DBTMEE Gene RefSeq Entrez Oo_FPKM 2C_FPKM 0018451 (v1.0) Sdcbp NM_001098227,NM_016807 53378 20.3875 9.22397
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided	DBTMEE Gene RefSeq Entrez Oo_1_1 Oo_2_1 0018451 (v1.0) Sdcbp NM_001098227,NM_016807 53378 16.1002 20.7567
NIA60mer	DBTMEE Array_Feature_Number Oligo_Parent_Clone Unigene Gene Entrez U_Cluster NAP_Cluster Gene_U/NAP TIGR SwissProt EST Oo 1C 2C 4C 8C Morula Blastocyst 0018451 (v1.0) 4934 G0115E02-3 Mm.14744 Sdcbp 53378 U004047 NAP120883-001 Sdcbp; TC835443 O08992 U,F,2 3.8333 3.8453 3.2558 3.2523 2.7584 3.0541 3.5279
MOE430	DBTMEE Probe_ID Unigene Gene RefSeq Entrez Oo 1C 2C 8C Blastocyst 0018451 (v1.0) 1450941_at Mm.247473 Sdcbp NM_001098227.1,NM_016807.2 53378 0 0 0 0 131.35
Agilent44K	DBTMEE Probe_ID Gene Acc Entrez Oo1_xFold Oo1_pVal Oo1_Flag Oo2_xFold Oo2_pVal Oo2_Flag 0018451 (v1.0) A_51_P249494 Sdcbp NM_016807 53378 1 1 P 0.619 0.131 P
Proteome	DBTMEE Gene Entrez GV_seqCount MII_seqCount Zygote_seqCount GV_specCount MII_specCount Zygote_specCount 0018451 (v1.0) Sdcbp 53378 3 2 0 3 5 0