DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0018464

Gene

Sdhd

Synonyms

Description

succinate dehydrogenase complex, subunit D, integral membrane protein

Locus

NM_025848 UCSC: chr9:50404445-50411954(-) OLP: chr9:50404445-50411954(-)

DB links

Entrez 66925
MGI 1914175
Ensembl ENSMUSG00000000171

Feature

protein-coding

GO_BP

3 Terms

GO_MF

2 Terms

GO_CC

5 Terms

KEGG

6 Terms

see DBTMEE:2019004 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0018464 (v1.0)	Sdhd	NM_025848	66925	126.29	33.9236	11.5209	12.5698	54.3432

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0018464 (v1.0)	Sdhd	NM_025848	66925	132.048	22.106	37.0114

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0018464 (v1.0)	Sdhd	NM_025848	66925	128.892	33.583	32.1912

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0018464 (v1.0)	Sdhd	NM_025848	66925	132.125	21.8032	35.3063

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0018464 (v1.0)	Sdhd	NM_025848	66925	10.6666	12.1367	13.8795

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0018464 (v1.0)	Sdhd	NM_025848	66925	52.7193	15.2627

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0018464 (v1.0)	Sdhd	NM_025848	66925	2.41778	0.499003

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0018464 (v1.0)	6361	H3023E11-3		3110001M13Rik	66925	U030842	NAP008227-001	3110001M13Rik;	TC836204	Q9CXV1	U,F	2.7991	3.1133	2.8833	3.0324	2.4776	2.9226	3.2086
0018464 (v1.0)	19572	L0281D05-3	Mm.10406	3110001M13Rik	66925							2.9542	2.9246	2.7234	2.7735	2.8541	2.8599	2.7823

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0018464 (v1.0)	1428235_at	Mm.10406	Sdhd	NM_025848.3	66925	975	245.625	0	0	704.65
0018464 (v1.0)	1437489_x_at	Mm.10406	Sdhd	NM_025848.3	66925	129.5	0	0	0	84.475

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0018464 (v1.0)	A_51_P260871	Sdhd	NM_025848	66925	1	1	P	0.385	0.0703	P

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0018464 (v1.0)	Sdhd	66925	2	0	0	2	0	0