DBTMEE:0018676
Gene | Sf3b1 |
Synonyms | Prp10 SAP155 SF3b155 Targ4 |
Description | splicing factor 3b, subunit 1 |
Locus | NM_031179 UCSC: chr1:55042013-55084322(-) OLP: chr1:55042013-55084322(-)
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DB links |

Entrez 81898 MGI 1932339 Ensembl ENSMUSG00000025982
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Feature | protein-coding |
GO_BP |
-
 3 Terms
RNA splicing, via transesterification reactions (GO:0000375)
mRNA splicing, via spliceosome (GO:0000398)
anterior/posterior pattern specification (GO:0009952)
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GO_MF |
-
 2 Terms
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GO_CC |
-
 4 Terms
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KEGG |
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 1 Terms
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Ver2_FPKM |
see DBTMEE:2019217 (v2.0)
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SPR_Histone_Erkek_5KaroundTSS |
N/A |
SPR_Histone_Erkek_2KaroundTSS |
N/A |
SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
SOLiD_OocyteTo4C_FPKM_gene_guided |
DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
0018676 (v1.0) | Sf3b1 | NM_031179 | 81898
| 92.7795 | 110.892 | 109.962 | 153.178 | 37.0202 | |
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SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
0018676 (v1.0) | Sf3b1 | NM_031179 | 81898
| 97.0094 | 7.4846 | 120.986 |
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SOLiD_Partheno1C_FPKM_gene_guided |
DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
0018676 (v1.0) | Sf3b1 | NM_031179 | 81898
| 94.6908 | 109.779 | 75.2587 |
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SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
0018676 (v1.0) | Sf3b1 | NM_031179 | 81898
| 97.0658 | 7.38209 | 82.5412 |
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SOLiD_Partheno4C_FPKM_gene_guided |
DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
0018676 (v1.0) | Sf3b1 | NM_031179 | 81898
| 101.808 | 147.9 | 144.732 |
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Illumina_Oo_2C_FPKM_gene_guided |
DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
0018676 (v1.0) | Sf3b1 | NM_031179 | 81898
| 61.441 | 23.4655 |
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SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
0018676 (v1.0) | Sf3b1 | NM_031179 | 81898
| 62.72 | 65.4993 |
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NIA60mer |
DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
0018676 (v1.0) | 6162 | H3019C08-5 | | Sf3b1 | 81898
| U021335 | NAP080981-1 | Sf3b1; | TC881625,TC819374,TC816777 | Q99NB9 | U,F,2 | 3.6403 | 3.5223 | 3.6857 | 3.6772 | 3.0954 | 3.3696 | 3.1608 |
0018676 (v1.0) | 17246 | K0545F04-3 | Mm.28150 | Sf3b1 | 81898
| U021335 | NAP031522-1 | Sf3b1; | TC819377,TC819374 | Q99NB9 | U,F,2 | 2.028 | 2.0069 | 2.3194 | 1.8981 | 2.1127 | 2.0919 | 2.1386 |
0018676 (v1.0) | 19534 | L0278B02-3 | Mm.28150 | Sf3b1 | 81898
| U021335 | NAP092929-001 | Sf3b1; | TC819376,TC819374 | Q99NB9 | U,F,2 | 4.6056 | 4.5713 | 4.2595 | 4.4815 | 3.9305 | 4.3104 | 4.0799 |
0018676 (v1.0) | 21504 | L0857D03-3 | Mm.28150 | Sf3b1 | 81898
| U021335 | NAP092929-001 | Sf3b1; | TC881625,TC819374 | Q99NB9 | U,F,2 | 3.0918 | 2.9307 | 1.9837 | 2.3495 | 2.6479 | 2.507 | 2.3109 |
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MOE430 |
DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
0018676 (v1.0) | 1418561_at | Mm.279736 | Sf3b1 | NM_031179.2 | 81898
| 81.15 | 139.775 | 45.15 | 0 | 32.85 |
0018676 (v1.0) | 1440818_s_at | Mm.279736 | Sf3b1 | NM_031179.2 | 81898
| 1291.9 | 2354.7 | 1292.7 | 3575.5 | 1951.28 |
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Agilent44K |
DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
0018676 (v1.0) | A_52_P625808 | Sf3b1 | NM_031179 | 81898
| 1 | 1 | P | 1.559 | 0.152 | P |
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Proteome |
DBTMEE | Gene | Entrez | GV_seqCount | MII_seqCount | Zygote_seqCount | GV_specCount | MII_specCount | Zygote_specCount |
0018676 (v1.0) | Sf3b1 | 81898
| 3 | 11 | 0 | 3 | 16 | 0 |
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