DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0018719

Gene

Sgol1

Synonyms

Description

shugoshin-like 1 (S. pombe)

Locus

NM_028232 UCSC: chr17:53814112-53828640(-) OLP: chr17:53814112-53828640(-)

DB links

Entrez 72415
MGI 1919665
Ensembl ENSMUSG00000023940
Vega OTTMUSG00000024480

Feature

protein-coding

GO_BP

7 Terms

GO_MF

GO_CC

11 Terms

KEGG

1 Terms

see DBTMEE:2019259 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0018719 (v1.0)	Sgol1	NM_028232	72415	29.7856	30.6627	35.0707	12.5813	13.2236

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0018719 (v1.0)	Sgol1	NM_028232	72415	31.1436	0.0963709	33.4537

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0018719 (v1.0)	Sgol1	NM_028232	72415	30.3993	30.3548	21.0549

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0018719 (v1.0)	Sgol1	NM_028232	72415	31.1617	0.095051	23.0923

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0018719 (v1.0)	Sgol1	NM_028232	72415	32.47	12.1478	13.1968

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0018719 (v1.0)	Sgol1	NM_028232	72415	36.6956	33.5468

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0018719 (v1.0)	Sgol1	NM_028232	72415	4.36433	8.02429

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0018719 (v1.0)	3885	C0904F08-3	Mm.153202	3300001M08Rik	72415	U037920	NAP095362-001	3300001M08Rik;	TC899407	Q9CXH7	U	3.2009	3.1419	3.2158	3.0234	2.9756	2.8805	2.894
0018719 (v1.0)	14995	J0948B07-3	Mm.153202	3300001M08Rik	72415	U037920	NAP095362-001	3300001M08Rik;	TC899407	Q9CXH7	U	3.0343	3.1179	3.1815	3.2871	2.727	2.9775	2.9141

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0018719 (v1.0)	1418919_at	Mm.153202	Sgol1	NM_028232.2	72415	239.2	193.975	917.75	0	351.1
0018719 (v1.0)	1439510_at	Mm.153202	Sgol1	NM_028232.2	72415	686.275	846.475	605.65	0	318.8

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0018719 (v1.0)	A_51_P487999	Sgol1	NM_028232	72415	1	1	P	0.564	0.11	P

N/A