DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018761
GeneSh3rf1
SynonymsPosh
Sh3md2
DescriptionSH3 domain containing ring finger 1
LocusNM_021506 UCSC: chr8:63702968-63874869(+) OLP: chr8:63702968-63874869(+)
DB links


Entrez 59009
MGI 1913066
Ensembl ENSMUSG00000031642
Featureprotein-coding
GO_BP
  •   5 Terms
      induction of apoptosis (GO:0006917)
      negative regulation of apoptotic process (GO:0043066)
      negative regulation of cysteine-type endopeptidase activity involved in apoptotic process (GO:0043154)
      regulation of JNK cascade (GO:0046328)
      negative regulation of extrinsic apoptotic signaling pathway (GO:2001237)
GO_MF
GO_CC
KEGG
Ver2_FPKM see DBTMEE:2019301 (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018761
(v1.0)		Sh3rf1NM_02150659009
45.232847.38122.62647.008621.96455
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018761
(v1.0)		Sh3rf1NM_02150659009
47.2952.4251551.6937
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018761
(v1.0)		Sh3rf1NM_02150659009
46.164646.905267.5347
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018761
(v1.0)		Sh3rf1NM_02150659009
47.32252.3919374.0697
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018761
(v1.0)		Sh3rf1NM_02150659009
20.94856.76717.69483
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018761
(v1.0)		Sh3rf1NM_02150659009
35.16937.78996
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018761
(v1.0)		Sh3rf1NM_02150659009
4.794899.26678
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018761
(v1.0)		1768C0251D04-3Mm.27949Posh-pending59009
U009370NAP005073-002Posh;TC859864O70254U,F,22.81232.75782.51782.52212.58412.50842.6923
0018761
(v1.0)		15525K0201C06-3Mm.27949Posh-pending59009
U009370NAP039959-1Posh;O70254U,F,23.30833.25363.60373.50543.34753.54543.3128
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018761
(v1.0)		1455149_atMm.27949Sh3rf1NM_021506.259009
192.775409.475178.9062.375
0018761
(v1.0)		1442402_atMm.27949Sh3rf1NM_021506.259009
418.2304.225321.7305.125343.975
Agilent44K
DBTMEEProbe_IDGeneAccEntrezOo1_xFoldOo1_pValOo1_FlagOo2_xFoldOo2_pValOo2_Flag
0018761
(v1.0)		A_51_P394754Sh3md2NM_02150659009
11P0.3040.0904P
0018761
(v1.0)		A_52_P1170840Sh3md2AK00863459009
11P0.6490.147P
0018761
(v1.0)		A_52_P299846Sh3md2NM_19867859009
11P0.540.103P
Proteome N/A