DBTMEE:0018825
| Gene | Sin3a |
| Synonyms | mSin3A
Sin3 |
| Description | transcriptional regulator, SIN3A (yeast) |
| Locus | NM_001110351 UCSC: chr9:56919847-56976175(+) OLP: chr9:56919847-56976175(+)
NM_001110350 UCSC: chr9:56924183-56976175(+) OLP: chr9:56924183-56976175(+)
NM_011378 UCSC: chr9:56924183-56976175(+) OLP: chr9:56924183-56976175(+)
|
| DB links |
Entrez 20466
MGI 107157
Ensembl ENSMUSG00000042557
Vega OTTMUSG00000036738
|
| Feature | protein-coding |
| GO_BP |
-
 21 Terms
negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
in utero embryonic development (GO:0001701)
activation of innate immune response (GO:0002218)
positive regulation of defense response to virus by host (GO:0002230)
DNA replication (GO:0006260)
transcription, DNA-dependent (GO:0006351)
regulation of transcription, DNA-dependent (GO:0006355)
protein deacetylation (GO:0006476)
aging (GO:0007568)
response to organic nitrogen (GO:0010243)
positive regulation of chromatin silencing (GO:0031937)
cellular protein localization (GO:0034613)
negative regulation of apoptotic process (GO:0043066)
regulation of transcription from RNA polymerase II promoter in response to oxidative stress (GO:0043619)
negative regulation of transcription, DNA-dependent (GO:0045892)
positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
interphase of mitotic cell cycle (GO:0051329)
response to methylglyoxal (GO:0051595)
cellular response to glucose stimulus (GO:0071333)
negative regulation of protein localization to nucleus (GO:1900181)
negative regulation of transcription regulatory region DNA binding (GO:2000678)
|
| GO_MF |
-
11 Terms
|
| GO_CC |
-
7 Terms
|
| KEGG |
-
1 Terms
|
| Ver2_FPKM |
see DBTMEE:2019366 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0018825
(v1.0) | Sin3a | NM_001110350,NM_001110351,NM_011378 | 20466
| 144.903 | 190.666 | 60.836 | 26.4335 | 11.2829 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0018825
(v1.0) | Sin3a | NM_001110350,NM_001110351,NM_011378 | 20466
| 151.509 | 3.60559 | 208.021 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0018825
(v1.0) | Sin3a | NM_001110350,NM_001110351,NM_011378 | 20466
| 147.888 | 188.752 | 163.219 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0018825
(v1.0) | Sin3a | NM_001110350,NM_001110351,NM_011378 | 20466
| 151.597 | 3.55621 | 179.013 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0018825
(v1.0) | Sin3a | NM_001110350,NM_001110351,NM_011378 | 20466
| 56.3246 | 25.5226 | 21.3242 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0018825
(v1.0) | Sin3a | NM_001110350,NM_001110351,NM_011378 | 20466
| 151.786 | 58.9527 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0018825
(v1.0) | Sin3a | NM_001110350,NM_001110351,NM_011378 | 20466
| 45.1105 | 57.296 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0018825
(v1.0) | 7834 | H3054G05-3 | Mm.15755 | Sin3a | 20466
| U010537 | NAP097181-001 | Sin3a; | TC794400,TC794397 | Q60520 | U,F,2 | 3.9179 | 3.812 | 3.54 | 3.581 | 2.7703 | 2.9545 | 2.8089 |
0018825
(v1.0) | 9792 | H3086E04-3 | | Sin3a | 20466
| U010537 | NAP079566-1 | Sin3a; | TC794398,TC794397 | Q60520 | U,F,2 | 3.5561 | 3.4615 | 3.1005 | 3.0251 | 2.6357 | 2.7994 | 2.7039 |
0018825
(v1.0) | 16901 | K0515H06-3 | Mm.15755 | Sin3a | 20466
| U010537 | NAP097180-001 | Sin3a; | TC794397 | Q60520 | U,F,2 | 3.9222 | 4.0904 | 3.6113 | 3.5737 | 3.3038 | 3.4182 | 3.3057 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0018825
(v1.0) | 1419101_at | Mm.15755 | Sin3a | NM_011378.2,NM_001110350.1,NM_001110351.1 | 20466
| 393.15 | 889.475 | 355.875 | 111.625 | 71.25 |
0018825
(v1.0) | 1419900_at | Mm.15755 | Sin3a | NM_011378.2,NM_001110350.1,NM_001110351.1 | 20466
| 0 | 61.875 | 0 | 0 | 0 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0018825
(v1.0) | A_51_P159415 | Sin3a | NM_011378 | 20466
| 1 | 1 | P | 2.057 | 0.0878 | P |
|
| Proteome |
| DBTMEE | Gene | Entrez | GV_seqCount | MII_seqCount | Zygote_seqCount | GV_specCount | MII_specCount | Zygote_specCount |
|---|
0018825
(v1.0) | Sin3a | 20466
| 0 | 4.5 | 0 | 0 | 4.5 | 0 |
|
