DBTMEE:0019742
| Gene | Spin1 |
| Synonyms | Spin |
| Description | spindlin 1 |
| Locus | NM_146043 UCSC: chr13:51196267-51244563(+) OLP: chr13:51196267-51244563(+)
NM_011462 UCSC: chr13:51228168-51247915(+) OLP: chr13:51228168-51247915(+)
|
| DB links |
Entrez 20729
MGI 109242
Ensembl ENSMUSG00000021395
|
| Feature | protein-coding |
| GO_BP |
-
 4 Terms
|
| GO_MF |
-
2 Terms
|
| GO_CC |
-
4 Terms
|
| KEGG | |
| Ver2_FPKM |
see DBTMEE:2020326 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0019742
(v1.0) | Spin1 | NM_011462,NM_146043 | 20729
| 2238.42 | 3416.68 | 831.742 | 144.339 | 33.4508 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0019742
(v1.0) | Spin1 | NM_011462,NM_146043 | 20729
| 2340.48 | 7.9559 | 3727.67 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0019742
(v1.0) | Spin1 | NM_011462,NM_146043 | 20729
| 2284.54 | 3382.37 | 4220.74 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0019742
(v1.0) | Spin1 | NM_011462,NM_146043 | 20729
| 2341.84 | 7.84693 | 4629.17 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0019742
(v1.0) | Spin1 | NM_011462,NM_146043 | 20729
| 770.064 | 139.365 | 218.629 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0019742
(v1.0) | Spin1 | NM_011462,NM_146043 | 20729
| 4576.01 | 1100.47 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0019742
(v1.0) | Spin1 | NM_011462,NM_146043 | 20729
| 1239.86 | 1399.27 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0019742
(v1.0) | 8605 | H3068G09-3 | | Spin | 20729
| U014839 | NAP092875-001 | Spin; | TC885681 | Q61142 | U,F,2 | 4.0679 | 4.2085 | 3.318 | 2.8436 | 2.1867 | 2.1514 | 2.1095 |
0019742
(v1.0) | 9613 | H3084A06-3 | Mm.42193 | Spin | 20729
| U014839 | NAP092873-001 | Spin; | TC885688,TC885681 | Q61142 | U,F,2 | 4.8473 | 5.2005 | 4.2434 | 3.5865 | 3.0351 | 3.229 | 3.1378 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0019742
(v1.0) | 1415794_a_at | Mm.188432 | Spin1 | NM_011462.2,NM_146043.3 | 20729
| 2526.73 | 5259 | 2212.15 | 159.125 | 168.1 |
0019742
(v1.0) | 1436809_a_at | Mm.188432 | Spin1 | NM_011462.2,NM_146043.3 | 20729
| 5739.9 | 11481.3 | 4997.33 | 339 | 547 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0019742
(v1.0) | A_51_P195135 | Spin | NM_011462 | 20729
| 1 | 1 | P | 0.919 | 0.552 | P |
0019742
(v1.0) | A_52_P50216 | Spin | NM_146043 | 20729
| 1 | 1 | P | 0.449 | 0.0794 | P |
|
| Proteome |
| DBTMEE | Gene | Entrez | GV_seqCount | MII_seqCount | Zygote_seqCount | GV_specCount | MII_specCount | Zygote_specCount |
|---|
0019742
(v1.0) | Spin1 | 20729
| 17 | 25 | 17 | 45 | 100 | 129 |
|
