DBTMEE

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DBTMEE:0019770

Gene

Spnb2

Synonyms

Sptbn1
beta fodrin
brain spectrin
elf1
elf3
non-erythrocytic
spectrin G
Spnb-2

Description

spectrin beta, non-erythrocytic 1

Locus

NM_175836 UCSC: chr11:29999395-30119772(-) OLP: chr11:29999395-30119772(-)
NM_009260 UCSC: chr11:30006843-30098257(-) OLP: chr11:30006843-30098257(-)

DB links

Entrez 20742
MGI 98388
Ensembl ENSMUSG00000020315
Vega OTTMUSG00000005341

Feature

protein-coding

GO_BP

GO_MF

GO_CC

KEGG

1 Terms

Ver2_FPKM

see (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0019770 (v1.0)	Spnb2	NM_009260,NM_175836	20742	26.102	25.7118	6.36445	3.9889	48.2629

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0019770 (v1.0)	Spnb2	NM_009260,NM_175836	20742	27.292	8.33632	28.0521

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0019770 (v1.0)	Spnb2	NM_009260,NM_175836	20742	26.6397	25.4536	19.8549

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0019770 (v1.0)	Spnb2	NM_009260,NM_175836	20742	27.3079	8.22214	21.7762

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0019770 (v1.0)	Spnb2	NM_009260,NM_175836	20742	5.89249	3.85144	4.65857

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0019770 (v1.0)	Spnb2	NM_009260,NM_175836	20742	46.0977	7.29029

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0019770 (v1.0)	Spnb2	NM_009260,NM_175836	20742	12.4418	19.0303

NIA60mer

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0019770 (v1.0)	501	C0112D03-3	Mm.220989			U032609	NAP100676-001	Spnb2;	TC875063	P70435	U,F,2	3.853	3.9038	2.8769	2.5021	2.2947	2.5589	2.9873
0019770 (v1.0)	5033	G0120A05-3	Mm.123110	Spnb2	20742	U032609	NAP025921-1	Spnb2;	TC805159	P70435	U,F,2	2.1724	2.3335	2.6409	2.3315	2.0634	2.0098	2.3124
0019770 (v1.0)	18304	L0079B04-3	Mm.123110	Spnb2	20742	U032609	NAP000261-001	Spnb2;	TC825805,TC805159	P70435	U,F,2	3.6887	3.8049	3.0247	2.3335	2.475	2.7479	3.0382

MOE430

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0019770 (v1.0)	1419255_at	Mm.123110	Spnb2	NM_009260.2,NM_175836.2	20742	54.05	60	63.4	0	102.275
0019770 (v1.0)	1452143_at	Mm.123110	Spnb2	NM_009260.2,NM_175836.2	20742	546.625	1100.78	287.6	74.375	542.125

Agilent44K

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0019770 (v1.0)	A_51_P273405	Spnb2	BC024833	20742	1	1	P	1.168	0.364	P
0019770 (v1.0)	A_52_P467690	Spnb2	NM_175836	20742	1	1	P	0.654	0.183	P

Proteome

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0019770 (v1.0)	Spnb2	20742	0	3	1	0	4	1