DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0019921

Gene

Ssx2ip

Synonyms

Adip

Description

synovial sarcoma, X breakpoint 2 interacting protein

Locus

NM_138744 UCSC: chr3:146067606-146103101(+) OLP: chr3:146067606-146103101(+)
NM_001253770 UCSC: chr3:146067606-146103101(+) OLP: chr3:146067606-146103101(+)
NM_001253768 UCSC: chr3:146067606-146103101(+) OLP: chr3:146067606-146103101(+)
NM_001253769 UCSC: chr3:146067606-146103101(+) OLP: chr3:146067606-146103101(+)

DB links

Entrez 99167
MGI 2139150
Ensembl ENSMUSG00000036825
Vega OTTMUSG00000022292

Feature

protein-coding

GO_BP

3 Terms

GO_MF

2 Terms

GO_CC

4 Terms

KEGG

1 Terms

see DBTMEE:2020509 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0019921 (v1.0)	Ssx2ip	NM_138744	99167	33.4579	43.1527	25.3543	13.8391	3.74505

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0019921 (v1.0)	Ssx2ip	NM_138744	99167	34.9833	8.85767	47.0806

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0019921 (v1.0)	Ssx2ip	NM_138744	99167	34.1472	42.7195	36.4561

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0019921 (v1.0)	Ssx2ip	NM_138744	99167	35.0036	8.73635	39.9838

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0019921 (v1.0)	Ssx2ip	NM_138744	99167	23.4741	13.3622	12.4565

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0019921 (v1.0)	Ssx2ip	NM_138744	99167	22.4916	14.0263

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0019921 (v1.0)	Ssx2ip	NM_138744	99167	6.33139	3.99467

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0019921 (v1.0)	11166	H3109D09-3	Mm.200783	AU014939	99167	U003960	NAP095022-001		TC869840,TC869839		U,F,2	3.5009	3.5213	3.0976	3.1924	3.2155	3.0611	3.2151

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0019921 (v1.0)	1448743_at	Mm.200783	Ssx2ip	NM_138744.2	99167	205.225	281.875	381.275	0	119.525

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0019921 (v1.0)	A_51_P330369	Ssx2ip	NM_138744	99167	1	1	P	0.623	0.133	P

N/A