DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0020048

Gene

Strbp

Synonyms

Spnr

Description

spermatid perinuclear RNA binding protein

Locus

NM_009261 UCSC: chr2:37425388-37502805(-) OLP: chr2:37425388-37502805(-)

DB links

Entrez 20744
MGI 104626
Ensembl ENSMUSG00000026915
Vega OTTMUSG00000012664

Feature

protein-coding

GO_BP

6 Terms

GO_MF

4 Terms

GO_CC

5 Terms

KEGG

see DBTMEE:2020638 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0020048 (v1.0)	Strbp	NM_009261	20744	7.72508	10.0164	10.5703	5.16312	1.75417

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0020048 (v1.0)	Strbp	NM_009261	20744	8.07728	1.2674	10.9281

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0020048 (v1.0)	Strbp	NM_009261	20744	7.88423	9.91585	8.31343

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0020048 (v1.0)	Strbp	NM_009261	20744	8.08197	1.25004	9.11789

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0020048 (v1.0)	Strbp	NM_009261	20744	9.78642	4.9852	5.1784

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0020048 (v1.0)	Strbp	NM_009261	20744	26.4828	10.0143

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0020048 (v1.0)	Strbp	NM_009261	20744	3.68338	4.28956

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0020048 (v1.0)	12325	H3141C09-3	Mm.30670	Spnr	20744	U022565	NAP094842-001	Spnr;	TC936259	Q62262	U,F,2	4.2679	4.2739	3.73	3.815	3.9563	3.8552	3.892
0020048 (v1.0)	16990	K0524G09-3	Mm.30670	Spnr	20744	U022565	NAP094842-001	Spnr;	TC936260	Q62262	U,F,2	1.8104	1.7345	1.8655	1.7843	1.8157	1.8232	1.8769

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0020048 (v1.0)	1426411_a_at	Mm.237095	Strbp	NM_009261.3	20744	137.575	225.05	204.075	0	68.8
0020048 (v1.0)	1442465_s_at	Mm.237095	Strbp	NM_009261.3	20744	895.975	1595.4	1666.38	663.575	677.65
0020048 (v1.0)	1457218_at	Mm.237095	Strbp	NM_009261.3	20744	0	0	0	0	358.675

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0020048 (v1.0)	A_51_P379390	Strbp	NM_009261	20744	1	1	P	0.674	0.158	P
0020048 (v1.0)	A_52_P634051	Strbp	BC014710	20744	1	1	P	0.89	0.452	P

N/A