DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0020075

Gene

Stxbp5

Synonyms

LGL3
tomosyn 1

Description

syntaxin binding protein 5 (tomosyn)

Locus

NM_001081344 UCSC: chr10:9475345-9620838(-) OLP: chr10:9475345-9620838(-)

DB links

Entrez 78808
MGI 1926058
Ensembl ENSMUSG00000019790
Vega OTTMUSG00000033369

Feature

protein-coding

GO_BP

7 Terms

GO_MF

3 Terms

GO_CC

6 Terms

KEGG

see DBTMEE:2020668 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0020075 (v1.0)	Stxbp5	NM_001081344	78808	10.0971	15.024	12.1177	3.43943	2.4819

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0020075 (v1.0)	Stxbp5	NM_001081344	78808	10.5575	2.59852	16.3915

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0020075 (v1.0)	Stxbp5	NM_001081344	78808	10.3051	14.8732	18.6909

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0020075 (v1.0)	Stxbp5	NM_001081344	78808	10.5636	2.56293	20.4996

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0020075 (v1.0)	Stxbp5	NM_001081344	78808	11.2191	3.32091	3.86463

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0020075 (v1.0)	Stxbp5	NM_001081344	78808	34.3053	20.4908

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0020075 (v1.0)	Stxbp5	NM_001081344	78808	8.17868	10.4982

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0020075 (v1.0)	910	C0159A10-3	Mm.133971	4930565N16Rik	78808	U043865	NAP036107-1	4930565N16Rik;	TC931431	Q9D2F3	U,F,2	3.2479	3.213	2.9886	2.9373	2.7504	2.7676	2.7158

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0020075 (v1.0)	1453021_at	Mm.331751	Stxbp5	NM_001081344.2	78808	390.75	582.025	702.25	172.775	187.5
0020075 (v1.0)	1430301_at	Mm.331751	Stxbp5	NM_001081344.2	78808	155.95	0	0	0	156.525
0020075 (v1.0)	1435398_at	Mm.331751	Stxbp5	NM_001081344.2	78808	180.85	526.3	569.675	0	0

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0020075 (v1.0)	A_52_P234695	Stxbp5	AK122417	78808	1	1	P	0.937	0.708	P
0020075 (v1.0)	A_52_P294605	Stxbp5	AK122417	78808	1	1	P	2.936	0.0629	P

N/A