DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0020081
GeneSub1
SynonymsP15
Pc4
Rpo2tc1
DescriptionSUB1 homolog (S. cerevisiae)
LocusNM_011294 UCSC: chr15:11911094-11925762(-) OLP: chr15:11911094-11925762(-)
DB links


Entrez 20024
MGI 104811
Ensembl ENSMUSG00000022205
Vega OTTMUSG00000023586
Featureprotein-coding
GO_BP
  •   3 Terms
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      regulation of transcription from RNA polymerase II promoter (GO:0006357)
GO_MF
GO_CC
KEGG
Ver2_FPKM see DBTMEE:2020674 (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020081
(v1.0)
Sub1NM_01129420024
53.227832.248418.865918.25219.46107
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0020081
(v1.0)
Sub1NM_01129420024
55.65467.6497135.1837
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0020081
(v1.0)
Sub1NM_01129420024
54.324431.924620.2047
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0020081
(v1.0)
Sub1NM_01129420024
55.68697.5449322.1598
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0020081
(v1.0)
Sub1NM_01129420024
17.466917.623116.0873
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0020081
(v1.0)
Sub1NM_01129420024
70.429379.7303
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0020081
(v1.0)
Sub1NM_01129420024
84.6041154.45
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0020081
(v1.0)
1472C0216G07-3Mm.41746Rpo2tc120024
U036014NAP005104-001Rpo2tc1;TC929871P11031U,F,23.07173.0542.68222.75382.79482.99933.1994
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0020081
(v1.0)
1422692_atMm.41746Sub1NM_011294.320024
0000126.175
Agilent44K
DBTMEEProbe_IDGeneAccEntrezOo1_xFoldOo1_pValOo1_FlagOo2_xFoldOo2_pValOo2_Flag
0020081
(v1.0)
A_52_P340607Rpo2tc1NM_01129420024
11P0.5690.112P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0020081
(v1.0)
Sub120024
69313315