DBTMEE:0020087
| Gene | Suds3 |
| Synonyms | |
| Description | suppressor of defective silencing 3 homolog (S. cerevisiae) |
| Locus | NM_178622 UCSC: chr5:117541689-117566002(-) OLP: chr5:117541689-117566002(-)
NM_001122666 UCSC: chr5:117541689-117566002(-) OLP: chr5:117541689-117566002(-)
|
| DB links |
Entrez 71954
MGI 1919204
Ensembl ENSMUSG00000066900
|
| Feature | protein-coding |
| GO_BP |
-
 5 Terms
negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
transcription, DNA-dependent (GO:0006351)
regulation of transcription, DNA-dependent (GO:0006355)
chromatin modification (GO:0016568)
negative regulation of transcription, DNA-dependent (GO:0045892)
|
| GO_MF |
-
4 Terms
|
| GO_CC |
-
1 Terms
|
| KEGG | |
| Ver2_FPKM |
see DBTMEE:2020680 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0020087
(v1.0) | Suds3 | NM_001122666,NM_178622 | 71954
| 46.7604 | 43.4455 | 53.0815 | 52.1855 | 21.083 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0020087
(v1.0) | Suds3 | NM_001122666,NM_178622 | 71954
| 48.8923 | 15.5005 | 47.4 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0020087
(v1.0) | Suds3 | NM_001122666,NM_178622 | 71954
| 47.7238 | 43.0092 | 37.2679 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0020087
(v1.0) | Suds3 | NM_001122666,NM_178622 | 71954
| 48.9207 | 15.2882 | 40.8742 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0020087
(v1.0) | Suds3 | NM_001122666,NM_178622 | 71954
| 49.1452 | 50.3872 | 61.0014 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0020087
(v1.0) | Suds3 | NM_001122666,NM_178622 | 71954
| 25.7235 | 11.845 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0020087
(v1.0) | Suds3 | NM_001122666,NM_178622 | 71954
| 9.39516 | 10.8122 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0020087
(v1.0) | 8352 | H3064C01-3 | | 2400003N08Rik | 71954
| U026649 | NAP003653-001 | | TC941579 | | U | 3.6823 | 3.9265 | 4.293 | 4.2549 | 3.8621 | 4.0203 | 3.9649 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0020087
(v1.0) | 1427896_at | Mm.34456 | Suds3 | NM_178622.4,NM_001122666.1 | 71954
| 173.375 | 0 | 158.625 | 235.55 | 142.75 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0020087
(v1.0) | A_52_P553171 | 2400003N08Rik | NM_178622 | 71954
| 1 | 1 | P | 1.668 | 0.123 | P |
0020087
(v1.0) | A_52_P579876 | 2400003N08Rik | NM_178622 | 71954
| 1 | 1 | P | 3.468 | 0.0522 | P |
|
| Proteome |
N/A |
