DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0020197
GeneSynj1
Synonyms
Descriptionsynaptojanin 1
LocusNM_001164483 UCSC: chr16:90936342-91011553(-) OLP: chr16:90936342-91011553(-)
NM_001045515 UCSC: chr16:90936346-91011340(-) OLP: chr16:90936346-91011340(-)
DB links


Entrez 104015
MGI 1354961
Ensembl ENSMUSG00000022973
Vega OTTMUSG00000027935
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
  •   3 Terms
      Inositol phosphate metabolism (mmu00562)
      Metabolic pathways (mmu01100)
      Phosphatidylinositol signaling system (mmu04070)
Ver2_FPKM see DBTMEE:2020795 (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020197
(v1.0)
Synj1NM_001045515,NM_001164483104015
15.628518.830911.36643.845761.61779
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0020197
(v1.0)
Synj1NM_001045515,NM_001164483104015
16.3412.5658220.5449
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0020197
(v1.0)
Synj1NM_001045515,NM_001164483104015
15.950518.641817.5786
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0020197
(v1.0)
Synj1NM_001045515,NM_001164483104015
16.35052.5306819.2797
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0020197
(v1.0)
Synj1NM_001045515,NM_001164483104015
10.52353.713233.94455
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0020197
(v1.0)
Synj1NM_001045515,NM_001164483104015
18.714416.8406
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0020197
(v1.0)
Synj1NM_001045515,NM_001164483104015
27.917723.48
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0020197
(v1.0)
1454961_atMm.187079Synj1NM_001164483.1,NM_001045515.1104015
1227.61526.45751.775488.5994.45
0020197
(v1.0)
1436333_a_atMm.187079Synj1NM_001164483.1,NM_001045515.1104015
545.7658.125360.0750440.5
Agilent44K
DBTMEEProbe_IDGeneAccEntrezOo1_xFoldOo1_pValOo1_FlagOo2_xFoldOo2_pValOo2_Flag
0020197
(v1.0)
A_52_P34012Synj1AB093272104015
11P0.3540.061P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0020197
(v1.0)
Synj1104015
431431