DBTMEE:0020504
| Gene | Tdrd1 |
| Synonyms | MTR-1 |
| Description | tudor domain containing 1 |
| Locus | NM_001002238 UCSC: chr19:56900699-56944502(+) OLP: chr19:56900699-56944502(+)
NM_001002240 UCSC: chr19:56900765-56944502(+) OLP: chr19:56900765-56944502(+)
NM_031387 UCSC: chr19:56900776-56944502(+) OLP: chr19:56900776-56944502(+)
NM_001002241 UCSC: chr19:56905202-56944502(+) OLP: chr19:56905202-56944502(+)
|
| DB links |
Entrez 83561
MGI 1933218
Ensembl ENSMUSG00000025081
Vega OTTMUSG00000028359
|
| Feature | protein-coding |
| GO_BP |
-
 8 Terms
|
| GO_MF |
-
3 Terms
|
| GO_CC |
-
5 Terms
|
| KEGG | |
| Ver2_FPKM |
see DBTMEE:2021110 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0020504
(v1.0) | Tdrd1 | NM_001002238,NM_001002240,NM_001002241,NM_031387 | 83561
| 123.31 | 97.3491 | 9.37203 | 3.66817 | 0.00297179 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0020504
(v1.0) | Tdrd1 | NM_001002238,NM_001002240,NM_001002241,NM_031387 | 83561
| 128.932 | 0.210236 | 106.21 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0020504
(v1.0) | Tdrd1 | NM_001002238,NM_001002240,NM_001002241,NM_031387 | 83561
| 125.85 | 96.3716 | 96.2189 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0020504
(v1.0) | Tdrd1 | NM_001002238,NM_001002240,NM_001002241,NM_031387 | 83561
| 129.007 | 0.207357 | 105.53 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0020504
(v1.0) | Tdrd1 | NM_001002238,NM_001002240,NM_001002241,NM_031387 | 83561
| 8.67704 | 3.54177 | 7.15903 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0020504
(v1.0) | Tdrd1 | NM_001002238,NM_001002240,NM_001002241,NM_031387 | 83561
| 190.044 | 10.4365 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0020504
(v1.0) | Tdrd1 | NM_001002238,NM_001002240,NM_001002241,NM_031387 | 83561
| 4.20181 | 4.93545 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0020504
(v1.0) | 12669 | H3149E09-3 | Mm.103193 | | | U019604 | NAP049996-1 | Tdrd;Tdrd1; | | Q99MV1 | | 2.3681 | 2.3899 | 2.4245 | 2.4169 | 2.1834 | 2.1658 | 2.195 |
|
| MOE430 |
N/A |
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0020504
(v1.0) | A_52_P48218 | Tdrd1 | NM_001002241 | 83561
| 1 | 1 | P | 0.625 | 0.134 | P |
|
| Proteome |
| DBTMEE | Gene | Entrez | GV_seqCount | MII_seqCount | Zygote_seqCount | GV_specCount | MII_specCount | Zygote_specCount |
|---|
0020504
(v1.0) | Tdrd1 | 83561
| 1 | 2 | 0 | 1 | 2 | 0 |
|
