| Gene | Tpm3 |
| Synonyms | gamma-TM
hTM30nm
hTMnm
skalphaTM.2
Tm5NM
Tpm-5
Tpm5
Trop-5 |
| Description | tropomyosin 3, gamma |
| Locus | NM_022314 UCSC: chr3:89876573-89904824(+) OLP: chr3:89876573-89904824(+)
NM_001253740 UCSC: chr3:89883443-89904824(+) OLP: chr3:89883443-89904824(+)
NM_001253738 UCSC: chr3:89883443-89904824(+) OLP: chr3:89883443-89904824(+)
NM_001271764 UCSC: chr3:89883443-89904824(+) OLP: chr3:89883443-89904824(+)
|
| DB links |
Entrez 59069
MGI 1890149
Ensembl ENSMUSG00000027940
Vega OTTMUSG00000029647
|
| Feature | protein-coding |
| GO_BP | |
| GO_MF |
-
 1 Terms
|
| GO_CC |
-
10 Terms
|
| KEGG |
-
5 Terms
|
| Ver2_FPKM |
see DBTMEE:2021849 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0021225
(v1.0) | Tpm3 | NM_022314 | 59069
| 18.0874 | 25.2244 | 106.132 | 117.449 | 78.3707 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0021225
(v1.0) | Tpm3 | NM_022314 | 59069
| 18.912 | 35.4085 | 27.5203 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0021225
(v1.0) | Tpm3 | NM_022314 | 59069
| 18.46 | 24.9711 | 26.2881 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0021225
(v1.0) | Tpm3 | NM_022314 | 59069
| 18.923 | 34.9236 | 28.8319 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0021225
(v1.0) | Tpm3 | NM_022314 | 59069
| 98.2617 | 113.402 | 108.01 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0021225
(v1.0) | Tpm3 | NM_022314 | 59069
| 36.7632 | 47.2289 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0021225
(v1.0) | Tpm3 | NM_022314 | 59069
| 9.23316 | 12.8534 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0021225
(v1.0) | 6298 | H3022F07-3 | | Tpm3 | 59069
| | | | | | | 2.9444 | 2.8559 | 3.0486 | 3.2267 | 3.116 | 3.3795 | 3.5204 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0021225
(v1.0) | 1427260_a_at | Mm.240839 | Tpm3 | NM_022314.2 | 59069
| 447.875 | 713.7 | 1378.57 | 1885.35 | 2635.68 |
0021225
(v1.0) | 1436958_x_at | Mm.240839 | Tpm3 | NM_022314.2 | 59069
| 110.1 | 176.75 | 976.775 | 1635.93 | 2527.3 |
0021225
(v1.0) | 1427567_a_at | Mm.240839 | Tpm3 | NM_022314.2 | 59069
| 0 | 0 | 115.275 | 121.675 | 223.85 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0021225
(v1.0) | A_52_P661033 | Tpm3 | NM_022314 | 59069
| 1 | 1 | P | 0.445 | 0.0781 | P |
|
| Proteome |
| DBTMEE | Gene | Entrez | GV_seqCount | MII_seqCount | Zygote_seqCount | GV_specCount | MII_specCount | Zygote_specCount |
|---|
0021225
(v1.0) | Tpm3 | 59069
| 4 | 2 | 0 | 7 | 6 | 0 |
|
