DBTMEE:0021262
Gene | Trafd1 |
Synonyms | Fln29 |
Description | TRAF type zinc finger domain containing 1 |
Locus | NM_172275 UCSC: chr5:121821734-121835624(-) OLP: chr5:121821734-121835624(-) NM_001163470 UCSC: chr5:121821734-121835624(-) OLP: chr5:121821734-121835624(-)
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DB links |

Entrez 231712 MGI 1923551 Ensembl ENSMUSG00000042726 Vega OTTMUSG00000026315
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Feature | protein-coding |
GO_BP |
-
 1 Terms
negative regulation of innate immune response (GO:0045824)
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GO_MF |
-
 3 Terms
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GO_CC |
-
 1 Terms
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KEGG | |
Ver2_FPKM |
see DBTMEE:2021887 (v2.0)
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SPR_Histone_Erkek_5KaroundTSS |
N/A |
SPR_Histone_Erkek_2KaroundTSS |
N/A |
SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
SOLiD_OocyteTo4C_FPKM_gene_guided |
DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
0021262 (v1.0) | Trafd1 | NM_001163470,NM_172275 | 231712
| 67.4433 | 103.293 | 11.615 | 7.008 | 12.7228 | |
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SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
0021262 (v1.0) | Trafd1 | NM_001163470,NM_172275 | 231712
| 70.5181 | 18.3702 | 112.694 |
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SOLiD_Partheno1C_FPKM_gene_guided |
DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
0021262 (v1.0) | Trafd1 | NM_001163470,NM_172275 | 231712
| 68.8327 | 102.255 | 100.339 |
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SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
0021262 (v1.0) | Trafd1 | NM_001163470,NM_172275 | 231712
| 70.5591 | 18.1186 | 110.048 |
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SOLiD_Partheno4C_FPKM_gene_guided |
DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
0021262 (v1.0) | Trafd1 | NM_001163470,NM_172275 | 231712
| 10.7537 | 6.76651 | 8.53299 |
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Illumina_Oo_2C_FPKM_gene_guided |
DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
0021262 (v1.0) | Trafd1 | NM_001163470,NM_172275 | 231712
| 29.034 | 4.71854 |
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SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
0021262 (v1.0) | Trafd1 | NM_001163470,NM_172275 | 231712
| 68.2162 | 57.5504 |
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NIA60mer |
DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
0021262 (v1.0) | 12954 | H3155F08-3 | Mm.20488 | Fln29-pending | 231712
| U026680 | NAP005689-001 | | TC847592,TC847588,TC847587 | | U,F,2 | 4.3846 | 4.3682 | 3.6892 | 3.6181 | 3.5504 | 3.5455 | 3.4927 |
0021262 (v1.0) | 17256 | K0546G09-3 | Mm.20488 | Fln29-pending | 231712
| | | Fln29-pending | TC847586 | | | 2.5914 | 2.4906 | 2.7025 | 2.5848 | 2.8149 | 2.657 | 2.7108 |
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MOE430 |
DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
0021262 (v1.0) | 1428346_at | Mm.20488 | Trafd1 | NM_001163470.1,NM_172275.2 | 231712
| 155.575 | 398.725 | 0 | 0 | 0 |
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Agilent44K |
DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
0021262 (v1.0) | A_51_P414412 | Trafd1 | NM_172275 | 231712
| 1 | 1 | P | 1.932 | 0.0957 | P |
0021262 (v1.0) | A_51_P486660 | Trafd1 | NM_172275 | 231712
| 1 | 1 | P | 1.063 | 0.656 | P |
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Proteome |
DBTMEE | Gene | Entrez | GV_seqCount | MII_seqCount | Zygote_seqCount | GV_specCount | MII_specCount | Zygote_specCount |
0021262 (v1.0) | Trafd1 | 231712
| 1 | 0 | 2 | 1 | 0 | 3 |
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