DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0021383

Gene

Trip4

Synonyms

ASC-1

Description

thyroid hormone receptor interactor 4

Locus

NM_019797 UCSC: chr9:65676733-65756601(-) OLP: chr9:65676733-65756601(-)
NM_001170907 UCSC: chr9:65676733-65732980(-) OLP: chr9:65676733-65732980(-)

DB links

Entrez 56404
MGI 1928469
Ensembl ENSMUSG00000032386
Vega OTTMUSG00000029847

Feature

protein-coding

GO_BP

2 Terms

GO_MF

3 Terms

GO_CC

3 Terms

KEGG

see DBTMEE:2022010 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0021383 (v1.0)	Trip4	NM_001170907,NM_019797	56404	11.4584	12.1623	4.99278	6.42523	3.71121

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0021383 (v1.0)	Trip4	NM_001170907,NM_019797	56404	11.9808	1.17403	13.2693

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0021383 (v1.0)	Trip4	NM_001170907,NM_019797	56404	11.6944	12.0401	10.159

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0021383 (v1.0)	Trip4	NM_001170907,NM_019797	56404	11.9877	1.15795	11.142

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0021383 (v1.0)	Trip4	NM_001170907,NM_019797	56404	4.62254	6.20382	6.47731

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0021383 (v1.0)	Trip4	NM_001170907,NM_019797	56404	9.80222	6.22429

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0021383 (v1.0)	Trip4	NM_001170907,NM_019797	56404	0.36106	1.08673

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0021383 (v1.0)	1126	C0179H08-3	Mm.27462	Trip4	56404	U031014	NAP004831-001	Trip4;	TC870742	Q9QXN3	U	2.5924	2.7576	2.7269	2.9747	2.7683	2.9926	2.6752
0021383 (v1.0)	15718	K0230B08-3	Mm.27462	Trip4	56404	U031014	NAP004831-002	Trip4;	TC926540	Q9QXN3	U	2.6553	2.7539	2.6252	2.2686	2.375	2.4764	2.443

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0021383 (v1.0)	1422857_at	Mm.208379	Trip4	NM_019797.4,NM_001170907.1	56404	726.7	231.45	291.575	123.175	106.025

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0021383 (v1.0)	A_51_P152234	Trip4	NM_019797	56404	1	1	P	0.48	0.115	P

N/A