DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0021691

Gene

Ubac2

Synonyms

Phgdhl1

Description

ubiquitin associated domain containing 2

Locus

NM_026861 UCSC: chr14:122277828-122420257(+) OLP: chr14:122277828-122420257(+)

DB links

Entrez 68889
MGI 1916139
Ensembl ENSMUSG00000041765

Feature

protein-coding

GO_BP

GO_MF

GO_CC

2 Terms

KEGG

see DBTMEE:2022325 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0021691 (v1.0)	Ubac2	NM_026861	68889	68.5542	30.3274	24.9405	8.68093	9.82877

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0021691 (v1.0)	Ubac2	NM_026861	68889	71.6797	9.28982	33.0878

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0021691 (v1.0)	Ubac2	NM_026861	68889	69.9665	30.0229	30.6279

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0021691 (v1.0)	Ubac2	NM_026861	68889	71.7214	9.16258	33.5916

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0021691 (v1.0)	Ubac2	NM_026861	68889	23.091	8.38179	9.94674

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0021691 (v1.0)	Ubac2	NM_026861	68889	14.255	3.56192

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0021691 (v1.0)	Ubac2	NM_026861	68889	72.5328	109.784

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0021691 (v1.0)	6572	H3028E10-3	Mm.34257	1190008A14Rik	68889	U015993	NAP094319-001	1190008A14Rik;	TC853452	Q9D0S5	U,F,2	3.3305	3.1562	3.1356	3.1852	3.611	3.356	3.4878
0021691 (v1.0)	19112	L0248A06-3	Mm.34257	1190008A14Rik	68889	U015993	NAP094319-001	1190008A14Rik;	TC853460,TC853459,TC853453,TC853452	Q9D0S5	U,F,2	4.3127	4.1537	3.1646	3.4104	3.2425	3.2517	3.3203

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0021691 (v1.0)	1423928_at	Mm.441151	Ubac2	NM_026861.2	68889	118.35	144.875	95.975	0	51.725

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0021691 (v1.0)	A_51_P353856	Phgdhl1	BC017635	68889	1	1	P	0.515	0.0979	P

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0021691 (v1.0)	Ubac2	68889	0	2	0	0	2	0