DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0021692

Gene

Ubap1

Synonyms

NAG20

Description

ubiquitin-associated protein 1

Locus

NM_023305 UCSC: chr4:41296029-41336799(+) OLP: chr4:41296029-41336799(+)

DB links

Entrez 67123
MGI 2149543
Ensembl ENSMUSG00000028437
Vega OTTMUSG00000006663

Feature

protein-coding

GO_BP

GO_MF

GO_CC

1 Terms

KEGG

see DBTMEE:2022328 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0021692 (v1.0)	Ubap1	NM_023305	67123	12.26	10.2787	41.9924	20.8482	10.5889

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0021692 (v1.0)	Ubap1	NM_023305	67123	12.819	7.04821	11.2142

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0021692 (v1.0)	Ubap1	NM_023305	67123	12.5126	10.1755	11.3297

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0021692 (v1.0)	Ubap1	NM_023305	67123	12.8264	6.95168	12.426

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0021692 (v1.0)	Ubap1	NM_023305	67123	38.8784	20.1297	22.0895

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0021692 (v1.0)	Ubap1	NM_023305	67123	5.36176	24.2884

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0021692 (v1.0)	Ubap1	NM_023305	67123	1.80475	0.498085

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0021692 (v1.0)	2280	C0308G07-3	Mm.29877	Ubap1	67123							2.6529	2.6345	2.2756	2.3676	2.0078	2.2254	2.2128
0021692 (v1.0)	3963	C0908E12-3	Mm.29877	Ubap1	67123	U004210	NAP001111-001	Ubap;Ubap1;	TC851321,TC814301	Q9ERV5	U,F,2	3.5455	3.4028	3.4621	3.8429	3.7977	3.663	3.7496
0021692 (v1.0)	5029	G0119H07-3	Mm.29877	Ubap1	67123	U004210	NAP093196-001	Ubap;Ubap1;	TC814301	Q9ERV5	U,F,2	3.7061	3.6224	3.4182	3.507	3.6655	3.5332	3.7477

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0021692 (v1.0)	1423185_a_at	Mm.289795	Ubap1	NM_023305.3	67123	0	0	605.275	199.7	159.35

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0021692 (v1.0)	A_52_P408499	Ubap1	AK051346	67123	1	1	P	1.513	0.218	P

N/A