DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0021722

Gene

Ube2l3

Synonyms

Ubce7
UbcM4

Description

ubiquitin-conjugating enzyme E2L 3

Locus

NM_009456 UCSC: chr16:17152108-17201585(-) OLP: chr16:17152108-17201585(-)

DB links

Entrez 22195
MGI 109240
Ensembl ENSMUSG00000038965
Vega OTTMUSG00000025066

Feature

protein-coding

GO_BP

8 Terms

GO_MF

3 Terms

GO_CC

2 Terms

KEGG

2 Terms

see DBTMEE:2022358 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0021722 (v1.0)	Ube2l3	NM_009456	22195	4.175	4.00471	39.2081	73.6023	39.6261

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0021722 (v1.0)	Ube2l3	NM_009456	22195	4.36535	24.9494	4.36923

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0021722 (v1.0)	Ube2l3	NM_009456	22195	4.26101	3.9645	4.90141

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0021722 (v1.0)	Ube2l3	NM_009456	22195	4.36788	24.6077	5.3757

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0021722 (v1.0)	Ube2l3	NM_009456	22195	36.3006	71.066	63.3829

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0021722 (v1.0)	Ube2l3	NM_009456	22195	2.1516	40.9149

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0021722 (v1.0)	Ube2l3	NM_009456	22195	2.00126	1.23462

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0021722 (v1.0)	5887	H3011F10-3	Mm.3074	Ube2l3	22195	U036841	NAP093243-001		TC873920,TC873918,TC873912		U,F,2	2.538	2.6883	3.3747	3.6243	3.3631	3.4826	3.2672
0021722 (v1.0)	12303	H3140B06-5		Ube2l3	22195	U036841	NAP093243-001	Ube2l3;	TC873914,TC873912		U,F,2	2.5251	2.4498	2.7477	2.9367	3.0345	3.1338	3.2544

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0021722 (v1.0)	1448879_at	Mm.3074	Ube2l3	NM_009456.2	22195	307.425	185.025	1303.45	2766.35	2506.2
0021722 (v1.0)	1417907_at	Mm.3074	Ube2l3	NM_009456.2	22195	0	0	183.575	546.075	758.15

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0021722 (v1.0)	A_52_P284162	Ube2l3	NM_009456	22195	1	1	P	0.616	0.208	P

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0021722 (v1.0)	Ube2l3	22195	1	2.5	1	1.5	4.5	1