DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0021775

Gene

Ubxn4

Synonyms

Ubxd2

Description

UBX domain protein 4

Locus

NM_026390 UCSC: chr1:130140758-130175954(+) OLP: chr1:130140758-130175954(+)

DB links

Entrez 67812
MGI 1915062
Ensembl ENSMUSG00000026353

Feature

protein-coding

GO_BP

1 Terms

GO_MF

GO_CC

4 Terms

KEGG

see DBTMEE:2022411 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0021775 (v1.0)	Ubxn4	NM_026390	67812	47.9644	35.8145	35.6984	18.5322	11.5965

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0021775 (v1.0)	Ubxn4	NM_026390	67812	50.1512	6.61926	39.0744

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0021775 (v1.0)	Ubxn4	NM_026390	67812	48.9525	35.4548	38.6758

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0021775 (v1.0)	Ubxn4	NM_026390	67812	50.1803	6.5286	42.4183

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0021775 (v1.0)	Ubxn4	NM_026390	67812	33.0512	17.8936	17.8473

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0021775 (v1.0)	Ubxn4	NM_026390	67812	41.6434	44.4221

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0021775 (v1.0)	Ubxn4	NM_026390	67812	26.7767	39.6153

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0021775 (v1.0)	7805	H3054B10-3	Mm.22397	1300013G12Rik	67812	U042203	NAP093313-001	1300013G12Rik;	TC909202,TC909200	Q9CT42	U,F,2	3.4878	3.6141	3.7908	4.083	3.2013	3.6267	3.3903
0021775 (v1.0)	19793	L0304F06-3	Mm.22397	1300013G12Rik	67812	U042203	NAP123577-1	1300013G12Rik;	TC909200	Q9CT42	U,F,2	3.3643	3.4234	2.8274	2.6957	2.4115	2.6656	2.7732

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0021775 (v1.0)	1426484_at	Mm.293321	Ubxn4	NM_026390.2	67812	51.7	129.475	55.775	0	0

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0021775 (v1.0)	A_52_P170610	Ubxd2	NM_026390	67812	1	1	P	0.327	0.0583	P
0021775 (v1.0)	A_52_P298145	Ubxd2	NM_026390	67812	1	1	P	0.31	0.0556	P

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0021775 (v1.0)	Ubxn4	67812	2	4	0	2	4	0