DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021867
GeneUpf3b
SynonymsRENT3B
UPF3X
DescriptionUPF3 regulator of nonsense transcripts homolog B (yeast)
LocusNM_026573 UCSC: chrX:34631829-34650317(-) OLP: chrX:34631829-34650317(-)
DB links


Entrez 68134
MGI 1915384
Ensembl ENSMUSG00000036572
Vega OTTMUSG00000017109
Featureprotein-coding
GO_BP
  •   3 Terms
      nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (GO:0000184)
      response to unfolded protein (GO:0006986)
      positive regulation of translation (GO:0045727)
GO_MF
GO_CC
KEGG
Ver2_FPKM see DBTMEE:2022505 (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021867
(v1.0)		Upf3bNM_02657368134
7.312525.34759.0636411.36094.48385
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021867
(v1.0)		Upf3bNM_02657368134
7.645911.561595.83423
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021867
(v1.0)		Upf3bNM_02657368134
7.463175.29384.24805
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021867
(v1.0)		Upf3bNM_02657368134
7.650351.540214.65912
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021867
(v1.0)		Upf3bNM_02657368134
8.3915210.969414.0711
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021867
(v1.0)		Upf3bNM_02657368134
27.319120.1818
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021867
(v1.0)		Upf3bNM_02657368134
14.500722.2827
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021867
(v1.0)		6677H3031A12-55730594O13Rik68134
5730594O13RikTC881717,TC8817132.72052.79322.55282.73832.63932.81212.6029
0021867
(v1.0)		7366H3046H10-35730594O13Rik68134
U039318NAP095319-001TC881713Q9CS15U,F2.52572.77242.88392.98612.65362.76182.4183
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021867
(v1.0)		1434842_s_atMm.271160Upf3bNM_026573.268134
480.425284.475391.35688.075287
Agilent44K
DBTMEEProbe_IDGeneAccEntrezOo1_xFoldOo1_pValOo1_FlagOo2_xFoldOo2_pValOo2_Flag
0021867
(v1.0)		A_51_P162649Upf3bBC05876168134
11P0.5490.107P
0021867
(v1.0)		A_51_P291139Upf3bXM_11078768134
11P0.6070.126P
Proteome N/A