DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0021902

Gene

Usp1

Synonyms

Description

ubiquitin specific peptidase 1

Locus

NM_146144 UCSC: chr4:98590501-98602224(+) OLP: chr4:98590501-98602224(+)

DB links

Entrez 230484
MGI 2385198
Ensembl ENSMUSG00000028560
Vega OTTMUSG00000008702

Feature

protein-coding

GO_BP

8 Terms

GO_MF

5 Terms

GO_CC

1 Terms

KEGG

see DBTMEE:2022545 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0021902 (v1.0)	Usp1	NM_146144	230484	80.8215	115.849	217.505	247.51	19.5151

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0021902 (v1.0)	Usp1	NM_146144	230484	84.5062	4.37999	126.394

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0021902 (v1.0)	Usp1	NM_146144	230484	82.4865	114.686	82.7478

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0021902 (v1.0)	Usp1	NM_146144	230484	84.5554	4.32	90.755

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0021902 (v1.0)	Usp1	NM_146144	230484	201.375	238.981	213.528

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0021902 (v1.0)	Usp1	NM_146144	230484	87.6674	172.288

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0021902 (v1.0)	Usp1	NM_146144	230484	27.9443	35.8696

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0021902 (v1.0)	7099	H3042A11-3	Mm.27496	MGC25559	230484	U004526	NAP096867-001	MGC25559;	TC919488,TC919487		U,F,2	3.3305	3.3458	3.1213	3.4815	2.71	3.013	2.7826
0021902 (v1.0)	10044	H3090B04-3		MGC25559	230484	U004526	NAP096867-001	Usp1	TC919488,TC919487		U,F,2	4.1506	4.0526	3.8248	4.5078	3.7923	3.7715	3.625

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0021902 (v1.0)	1451080_at	Mm.371692	Usp1	NM_146144.3	230484	1044.78	1527.72	2960.27	3041.02	941.525

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0021902 (v1.0)	A_51_P381657	Usp1	NM_146144	230484	1	1	P	0.728	0.194	P

N/A