DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0021908

Gene

Usp15

Synonyms

Gcap18

Description

ubiquitin specific peptidase 15

Locus

NM_027604 UCSC: chr10:122550300-122633979(-) OLP: chr10:122550300-122633979(-)

DB links

Entrez 14479
MGI 101857
Ensembl ENSMUSG00000020124

Feature

protein-coding

GO_BP

8 Terms

GO_MF

9 Terms

GO_CC

2 Terms

KEGG

see DBTMEE:2022551 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0021908 (v1.0)	Usp15	NM_027604	14479	159.193	248.782	65.138	30.5329	11.9972

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0021908 (v1.0)	Usp15	NM_027604	14479	166.451	9.90466	271.426

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0021908 (v1.0)	Usp15	NM_027604	14479	162.472	246.284	189.921

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0021908 (v1.0)	Usp15	NM_027604	14479	166.547	9.769	208.299

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0021908 (v1.0)	Usp15	NM_027604	14479	60.3076	29.4808	32.5677

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0021908 (v1.0)	Usp15	NM_027604	14479	217.57	109.607

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0021908 (v1.0)	Usp15	NM_027604	14479	71.0031	54.281

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0021908 (v1.0)	1149	C0181C12-3	Mm.24280	Usp15	14479	U032311	NAP093334-001	4921514G19Rik;Usp15;	TC941645,TC925466	Q9D5V8	U,F,2	4.1093	4.1636	3.4722	3.4026	3.1123	3.369	3.2236
0021908 (v1.0)	4786	G0106A11-3	Mm.24280	Usp15	14479			Usp15				3.5263	3.6022	3.5363	3.3837	3.4104	3.0846	3.2235
0021908 (v1.0)	16847	K0510A03-3	Mm.217239			U032311	NAP035291-1	4921514G19Rik;Usp15;	TC907355	Q9D5V8	U,F,2	2.4091	2.4418	2.4532	2.4594	2.6889	2.6714	2.5866

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0021908 (v1.0)	1454036_a_at	Mm.244209	Usp15	NM_027604.3	14479	350.9	906.625	822.275	0	118.9
0021908 (v1.0)	1436891_at	Mm.244209	Usp15	NM_027604.3	14479	505.875	716.95	550.2	0	0
0021908 (v1.0)	1447881_x_at	Mm.244209	Usp15	NM_027604.3	14479	1088.07	1303.6	1043.65	0	0

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0021908 (v1.0)	A_51_P213896	Usp15	AK014891	14479	1	1	P	1.613	0.131	P
0021908 (v1.0)	A_51_P213898	Usp15	NM_027604	14479	1	1	P	1.061	0.662	P
0021908 (v1.0)	A_52_P124812	Usp15	AK122301	14479	1	1	P	1.317	0.221	P
0021908 (v1.0)	A_52_P6073	Usp15	NM_027604	14479	1	1	P	0.706	0.197	P

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0021908 (v1.0)	Usp15	14479	14	24	1	21	39	4