DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0021951

Gene

Usp8

Synonyms

Ubpy

Description

ubiquitin specific peptidase 8

Locus

NM_019729 UCSC: chr2:126533064-126585050(+) OLP: chr2:126533064-126585050(+)
NM_001252580 UCSC: chr2:126533064-126585050(+) OLP: chr2:126533064-126585050(+)

DB links

Entrez 84092
MGI 1934029
Ensembl ENSMUSG00000027363
Vega OTTMUSG00000015864

Feature

protein-coding

GO_BP

9 Terms

GO_MF

7 Terms

GO_CC

11 Terms

KEGG

1 Terms

see DBTMEE:2022598 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0021951 (v1.0)	Usp8	NM_019729	84092	31.6119	33.4161	12.1759	15.6618	13.3497

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0021951 (v1.0)	Usp8	NM_019729	84092	33.0532	7.25335	36.4577

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0021951 (v1.0)	Usp8	NM_019729	84092	32.2632	33.0806	30.945

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0021951 (v1.0)	Usp8	NM_019729	84092	33.0724	7.15401	33.9394

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0021951 (v1.0)	Usp8	NM_019729	84092	11.273	15.1221	15.1752

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0021951 (v1.0)	Usp8	NM_019729	84092	84.5441	26.6207

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0021951 (v1.0)	Usp8	NM_019729	84092	1.22939	2.60627

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0021951 (v1.0)	2332	C0311F09-3	Mm.215595			U002421	NAP020652-001	Usp8;	TC919426	Q9EQU1	U,F,2	1.8193	2.1577	1.8913	2.0992	2.3345	2.0409	2.4936
0021951 (v1.0)	18396	L0205E11-3	Mm.36569	Usp8	84092	U002421	NAP096327-001	Usp8;	TC919425	Q9EQU1	U,F,2	3.0382	3.075	3.1293	3.1753	2.881	3.0486	2.9296

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0021951 (v1.0)	1422883_at	Mm.272629	Usp8	NM_019729.2	84092	155.2	171.075	223.875	0	132.825
0021951 (v1.0)	1446807_at	Mm.272629	Usp8	NM_019729.2	84092	141.475	136.75	205.725	195.95	271.65

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0021951 (v1.0)	A_51_P382718	Usp8	NM_019729	84092	1	1	P	0.455	0.139	P

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0021951 (v1.0)	Usp8	84092	0	1	0.5	0	1	0.5