DBTMEE:0022033
| Gene | Vipas39 |
| Synonyms | SPE-39
Vipar |
| Description | VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog |
| Locus | NM_134044 UCSC: chr12:88579825-88605194(-) OLP: chr12:88579825-88605194(-)
NM_001142581 UCSC: chr12:88579825-88607236(-) OLP: chr12:88579825-88607236(-)
NM_001142580 UCSC: chr12:88579825-88607236(-) OLP: chr12:88579825-88607236(-)
|
| DB links |
Entrez 104799
MGI 2144805
Ensembl ENSMUSG00000021038
|
| Feature | protein-coding |
| GO_BP |
-
 8 Terms
|
| GO_MF | |
| GO_CC |
-
6 Terms
|
| KEGG | |
| Ver2_FPKM |
see DBTMEE:2022680 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0022033
(v1.0) | Vipar | NM_001142580,NM_001142581,NM_134044 | 104799
| 9.57654 | 9.65527 | 3.11658 | 3.85213 | 7.23394 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0022033
(v1.0) | Vipar | NM_001142580,NM_001142581,NM_134044 | 104799
| 10.0131 | 6.25027 | 10.5341 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0022033
(v1.0) | Vipar | NM_001142580,NM_001142581,NM_134044 | 104799
| 9.77382 | 9.55832 | 11.224 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0022033
(v1.0) | Vipar | NM_001142580,NM_001142581,NM_134044 | 104799
| 10.019 | 6.16467 | 12.3101 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0022033
(v1.0) | Vipar | NM_001142580,NM_001142581,NM_134044 | 104799
| 2.88546 | 3.71938 | 3.25142 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0022033
(v1.0) | Vipar | NM_001142580,NM_001142581,NM_134044 | 104799
| 5.32033 | 2.81173 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0022033
(v1.0) | Vipar | NM_001142580,NM_001142581,NM_134044 | 104799
| 7.99206 | 1.08394 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0022033
(v1.0) | 434 | C0106F08-3 | Mm.29034 | AI413782 | 104799
| U034210 | NAP002909-001 | AI413782; | TC914214,TC821892 | Q91YI3 | | 3.7825 | 3.9188 | 3.9505 | 3.8484 | 3.7504 | 3.8709 | 3.893 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0022033
(v1.0) | 1416096_at | Mm.208750 | Vipar | NM_001142580.1,NM_134044.3,NM_001142581.1 | 104799
| 198.75 | 166.825 | 156.625 | 99.425 | 291.425 |
0022033
(v1.0) | 1438983_x_at | Mm.208750 | Vipar | NM_001142580.1,NM_134044.3,NM_001142581.1 | 104799
| 217.825 | 207.275 | 213.225 | 217.525 | 372.4 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0022033
(v1.0) | A_51_P143721 | AI413782 | NM_134044 | 104799
| 1 | 1 | P | 0.846 | 0.342 | P |
0022033
(v1.0) | A_52_P164310 | AI413782 | NM_134044 | 104799
| 1 | 1 | P | 0.649 | 0.203 | P |
|
| Proteome |
N/A |
