DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0022386
GeneVps13a
Synonyms
Descriptionvacuolar protein sorting 13A (yeast)
LocusNM_173028 UCSC: chr19:16689856-16855423(-) OLP: chr19:16689856-16855423(-)
DB links


Entrez 271564
MGI 2444304
Ensembl ENSMUSG00000046230
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM see DBTMEE:2023036 (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0022386
(v1.0)
Vps13aNM_173028271564
44.844139.61224.2899.982328.64322
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0022386
(v1.0)
Vps13aNM_173028271564
46.88861.4896643.2176
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0022386
(v1.0)
Vps13aNM_173028271564
45.767939.214330.9368
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0022386
(v1.0)
Vps13aNM_173028271564
46.91591.4692533.9304
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0022386
(v1.0)
Vps13aNM_173028271564
22.48789.6383310.411
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0022386
(v1.0)
Vps13aNM_173028271564
43.334713.8948
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0022386
(v1.0)
Vps13aNM_173028271564
2.941054.6141
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0022386
(v1.0)
16660K0440H04-3Mm.1488194930425F11271564
U038891NAP000169-002TC821360U,F,23.52523.62182.78522.42372.36772.35682.3284
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0022386
(v1.0)
1430154_atMm.211963Vps13aNM_173028.3271564
929.45742.125623.125262.275313.05
0022386
(v1.0)
1440146_atMm.211963Vps13aNM_173028.3271564
212.875279.775000
0022386
(v1.0)
1440482_atMm.211963Vps13aNM_173028.3271564
471.525573.4000
0022386
(v1.0)
1457674_atMm.211963Vps13aNM_173028.3271564
1268.9501146.8200
Agilent44K
DBTMEEProbe_IDGeneAccEntrezOo1_xFoldOo1_pValOo1_FlagOo2_xFoldOo2_pValOo2_Flag
0022386
(v1.0)
A_52_P306217Vps13aNM_173028271564
11P1.1940.329P
0022386
(v1.0)
A_52_P493502Vps13aAK015803271564
11P0.5140.105P
0022386
(v1.0)
A_52_P589780Vps13aBC050055271564
11P1.4480.168P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0022386
(v1.0)
Vps13a271564
430430