| Gene | Vps13a |
| Synonyms | |
| Description | vacuolar protein sorting 13A (yeast) |
| Locus | NM_173028 UCSC: chr19:16689856-16855423(-) OLP: chr19:16689856-16855423(-)
|
| DB links |
Entrez 271564
MGI 2444304
Ensembl ENSMUSG00000046230
|
| Feature | protein-coding |
| GO_BP |
-
 6 Terms
|
| GO_MF | |
| GO_CC |
-
1 Terms
|
| KEGG | |
| Ver2_FPKM |
see DBTMEE:2023036 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0022386
(v1.0) | Vps13a | NM_173028 | 271564
| 44.8441 | 39.612 | 24.289 | 9.98232 | 8.64322 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0022386
(v1.0) | Vps13a | NM_173028 | 271564
| 46.8886 | 1.48966 | 43.2176 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0022386
(v1.0) | Vps13a | NM_173028 | 271564
| 45.7679 | 39.2143 | 30.9368 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0022386
(v1.0) | Vps13a | NM_173028 | 271564
| 46.9159 | 1.46925 | 33.9304 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0022386
(v1.0) | Vps13a | NM_173028 | 271564
| 22.4878 | 9.63833 | 10.411 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0022386
(v1.0) | Vps13a | NM_173028 | 271564
| 43.3347 | 13.8948 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0022386
(v1.0) | Vps13a | NM_173028 | 271564
| 2.94105 | 4.6141 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0022386
(v1.0) | 16660 | K0440H04-3 | Mm.148819 | 4930425F11 | 271564
| U038891 | NAP000169-002 | | TC821360 | | U,F,2 | 3.5252 | 3.6218 | 2.7852 | 2.4237 | 2.3677 | 2.3568 | 2.3284 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0022386
(v1.0) | 1430154_at | Mm.211963 | Vps13a | NM_173028.3 | 271564
| 929.45 | 742.125 | 623.125 | 262.275 | 313.05 |
0022386
(v1.0) | 1440146_at | Mm.211963 | Vps13a | NM_173028.3 | 271564
| 212.875 | 279.775 | 0 | 0 | 0 |
0022386
(v1.0) | 1440482_at | Mm.211963 | Vps13a | NM_173028.3 | 271564
| 471.525 | 573.4 | 0 | 0 | 0 |
0022386
(v1.0) | 1457674_at | Mm.211963 | Vps13a | NM_173028.3 | 271564
| 1268.95 | 0 | 1146.82 | 0 | 0 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0022386
(v1.0) | A_52_P306217 | Vps13a | NM_173028 | 271564
| 1 | 1 | P | 1.194 | 0.329 | P |
0022386
(v1.0) | A_52_P493502 | Vps13a | AK015803 | 271564
| 1 | 1 | P | 0.514 | 0.105 | P |
0022386
(v1.0) | A_52_P589780 | Vps13a | BC050055 | 271564
| 1 | 1 | P | 1.448 | 0.168 | P |
|
| Proteome |
| DBTMEE | Gene | Entrez | GV_seqCount | MII_seqCount | Zygote_seqCount | GV_specCount | MII_specCount | Zygote_specCount |
|---|
0022386
(v1.0) | Vps13a | 271564
| 4 | 3 | 0 | 4 | 3 | 0 |
|
