• • TOP
  • Introduction
  • Gene Search
    
  • Table Browser
  • Tools
  • GEO collection
  • Help
  • Tutorials
  • Statistics
  • Download
  • Credits

DB status: OK
Last modified: 2024/03/24

Gene Search:

Warning: Undefined array key 0 in /rshare1/ZETTAI_path_WA_slash_usr_slash_proj_KARA/usr/proj/dbtmee/cgi-bin/gc_function.php on line 224

Warning: Trying to access array offset on null in /rshare1/ZETTAI_path_WA_slash_usr_slash_proj_KARA/usr/proj/dbtmee/cgi-bin/gc_function.php on line 224

Warning: Undefined array key 0 in /rshare1/ZETTAI_path_WA_slash_usr_slash_proj_KARA/usr/proj/dbtmee/cgi-bin/gc_function.php on line 225

Warning: Trying to access array offset on null in /rshare1/ZETTAI_path_WA_slash_usr_slash_proj_KARA/usr/proj/dbtmee/cgi-bin/gc_function.php on line 225

DBTMEE:0022581

Gene	Whsc2
Synonyms	Nelf-A Whsc2h
Description	Wolf-Hirschhorn syndrome candidate 2 (human)
Locus	NM_011914 UCSC: chr5:34240829-34278907(-) OLP: chr5:34240829-34278907(-)
DB links	Entrez 24116 MGI 1346098 Ensembl ENSMUSG00000029111 Vega OTTMUSG00000025105
Feature	protein-coding
GO_BP	3 Terms transcription, DNA-dependent (GO:0006351) regulation of transcription, DNA-dependent (GO:0006355) negative regulation of transcription elongation from RNA polymerase II promoter (GO:0034244)
GO_MF	1 Terms chromatin binding (GO:0003682)
GO_CC	2 Terms nucleus (GO:0005634) NELF complex (GO:0032021)
KEGG
Ver2_FPKM	see  (v2.0)
SPR_Histone_Erkek_5KaroundTSS	N/A
SPR_Histone_Erkek_2KaroundTSS	N/A
SPR_Methy_Kobayashi_5KaroundTSS	N/A
SPR_Methy_Kobayashi_2KaroundTSS	N/A
SOLiD_OocyteTo4C_FPKM_gene_guided	DBTMEE Gene RefSeq Entrez SPR_FPKM Oo_FPKM 1C_FPKM 2C_FPKM 4C_FPKM MEF_FPKM 0022581 (v1.0) Whsc2 NM_011914 24116 152.191 86.449 50.8825 53.385 16.4526
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided	DBTMEE Gene RefSeq Entrez Oo_FPKM SPR_FPKM 1C_FPKM 0022581 (v1.0) Whsc2 NM_011914 24116 159.13 2.92412 94.3177
SOLiD_Partheno1C_FPKM_gene_guided	DBTMEE Gene RefSeq Entrez Oo_FPKM 1C_FPKM p1C_FPKM 0022581 (v1.0) Whsc2 NM_011914 24116 155.327 85.5809 90.0048
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided	DBTMEE Gene RefSeq Entrez Oo_FPKM SPR_FPKM p1C_FPKM 0022581 (v1.0) Whsc2 NM_011914 24116 159.222 2.88407 98.7142
SOLiD_Partheno4C_FPKM_gene_guided	DBTMEE Gene RefSeq Entrez 2C_FPKM 4C_FPKM p4C_FPKM 0022581 (v1.0) Whsc2 NM_011914 24116 47.1093 51.5453 50.6168
Illumina_Oo_2C_FPKM_gene_guided	DBTMEE Gene RefSeq Entrez Oo_FPKM 2C_FPKM 0022581 (v1.0) Whsc2 NM_011914 24116 159.672 58.1565
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided	DBTMEE Gene RefSeq Entrez Oo_1_1 Oo_2_1 0022581 (v1.0) Whsc2 NM_011914 24116 26.9422 34.3123
NIA60mer	DBTMEE Array_Feature_Number Oligo_Parent_Clone Unigene Gene Entrez U_Cluster NAP_Cluster Gene_U/NAP TIGR SwissProt EST Oo 1C 2C 4C 8C Morula Blastocyst 0022581 (v1.0) 12520 H3145B06-3 Mm.71361 Whsc2h 24116 U026092 NAP003894-001 Whsc2h; TC904277 Q9Z1V9 U,F,2 3.5595 3.4755 3.2862 3.5326 3.284 3.3951 3.2925
MOE430	DBTMEE Probe_ID Unigene Gene RefSeq Entrez Oo 1C 2C 8C Blastocyst 0022581 (v1.0) 1427248_at Mm.332320 Whsc2 NM_011914.2 24116 589.95 1329.3 663.55 384.1 229.6
Agilent44K	DBTMEE Probe_ID Gene Acc Entrez Oo1_xFold Oo1_pVal Oo1_Flag Oo2_xFold Oo2_pVal Oo2_Flag 0022581 (v1.0) A_52_P242329 Whsc2 NM_011914 24116 1 1 P 0.193 0.0458 P 0022581 (v1.0) A_52_P595954 Whsc2 NM_011914 24116 1 1 P 0.901 0.485 P
Proteome	N/A