DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0022594

Gene

Wnk1

Synonyms

EG406236
Hsn2
Prkwnk1

Description

WNK lysine deficient protein kinase 1

Locus

NM_001185021 UCSC: chr6:119873987-119988673(-) OLP: chr6:119873987-119988673(-)
NM_001185020 UCSC: chr6:119873987-119988673(-) OLP: chr6:119873987-119988673(-)
NM_198703 UCSC: chr6:119873987-119988673(-) OLP: chr6:119873987-119988673(-)
NM_001199084 UCSC: chr6:119873987-119988673(-) OLP: chr6:119873987-119988673(-)
NM_001199083 UCSC: chr6:119873987-119988673(-) OLP: chr6:119873987-119988673(-)

DB links

Entrez 232341
MGI 2442092
Ensembl ENSMUSG00000045962
Vega OTTMUSG00000031633

Feature

protein-coding

GO_BP

11 Terms

GO_MF

14 Terms

GO_CC

1 Terms

KEGG

see DBTMEE:2023242 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0022594 (v1.0)	Wnk1	NM_001185020,NM_001185021,NM_001199083,NM_001199084,NM_198703	232341	50.6165	25.2531	45.9014	55.7212	10.4307

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0022594 (v1.0)	Wnk1	NM_001185020,NM_001185021,NM_001199083,NM_001199084,NM_198703	232341	52.9242	15.217	27.5517

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0022594 (v1.0)	Wnk1	NM_001185020,NM_001185021,NM_001199083,NM_001199084,NM_198703	232341	51.6593	24.9995	29.5553

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0022594 (v1.0)	Wnk1	NM_001185020,NM_001185021,NM_001199083,NM_001199084,NM_198703	232341	52.955	15.0085	32.4152

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0022594 (v1.0)	Wnk1	NM_001185020,NM_001185021,NM_001199083,NM_001199084,NM_198703	232341	42.4976	53.801	62.2875

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0022594 (v1.0)	Wnk1	NM_001185020,NM_001185021,NM_001199083,NM_001199084,NM_198703	232341	121.142	159.739

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0022594 (v1.0)	Wnk1	NM_001185020,NM_001185021,NM_001199083,NM_001199084,NM_198703	232341	16.748	20.454

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0022594 (v1.0)	6525	H3026F04-3	Mm.21773		232341	U027801	NAP121105-001	PRKWNK1;Prkwnk1;	TC819835		U,F,2	3.47	3.6613	3.0856	3.2432	2.7216	2.9725	3.005
0022594 (v1.0)	9678	H3084H07-3	Mm.21773		232341							2.8023	2.7467	2.6293	3.1521	2.7122	2.6156	2.6356

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0022594 (v1.0)	1433676_at	Mm.484782	Wnk1		232341	1243.9	1450.43	1260.7	1320.2	913.6
0022594 (v1.0)	1436746_at	Mm.484782	Wnk1		232341	899.75	1455.07	1141.18	875.175	485.825

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0022594 (v1.0)	A_51_P318564	Prkwnk1	NM_198703	232341	1	1	P	1.475	0.199	P
0022594 (v1.0)	A_52_P171064	Prkwnk1	NM_198703	232341	1	1	P	3.374	0.0587	P
0022594 (v1.0)	A_52_P82209	Prkwnk1	NM_198703	232341	1	1	P	0.255	0.0839	P

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0022594 (v1.0)	Wnk1	232341	3	4	1	5	6	1