DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0022693
GeneYbx1
SynonymsdbpB
DNA binding protein B
EF1A
MSY1
Nsep1
YB-1
DescriptionY box protein 1
LocusNM_011732 UCSC: chr4:118949932-118967118(-) OLP: chr4:118949932-118967118(-)
DB links


Entrez 22608
MGI 99146
Ensembl ENSMUSG00000028639
Vega OTTMUSG00000009259
Featureprotein-coding
GO_BP
  •   13 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      in utero embryonic development (GO:0001701)
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      mRNA processing (GO:0006397)
      positive regulation of cell proliferation (GO:0008284)
      RNA splicing (GO:0008380)
      negative regulation of apoptotic process (GO:0043066)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      negative regulation of insulin receptor signaling pathway (GO:0046627)
      negative regulation of striated muscle cell differentiation (GO:0051154)
      positive regulation of cell division (GO:0051781)
      CRD-mediated mRNA stabilization (GO:0070934)
GO_MF
GO_CC
KEGG
Ver2_FPKM see DBTMEE:2023345 (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0022693
(v1.0)		Ybx1NM_01173222608
119.582177.824287.453379.14676.8708
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0022693
(v1.0)		Ybx1NM_01173222608
125.03470.074194.01
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0022693
(v1.0)		Ybx1NM_01173222608
122.045176.039207.754
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0022693
(v1.0)		Ybx1NM_01173222608
125.10769.1142227.857
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0022693
(v1.0)		Ybx1NM_01173222608
266.136366.081367.042
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0022693
(v1.0)		Ybx1NM_01173222608
206.338169.008
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0022693
(v1.0)		Ybx1NM_01173222608
14.742124.3137
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0022693
(v1.0)		9765H3086B04-3Mm.21054Nsep122608
U025465NAP092351-001TC874175,TC874174,TC874173P27817U,F,24.33694.12824.59665.29824.68344.90114.8359
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0022693
(v1.0)		1418624_atMm.258204Ybx1NM_011732.222608
1704.355046.775188.155976.553843.8
0022693
(v1.0)		1430720_atMm.258204Ybx1NM_011732.222608
0123.175000
Agilent44K
DBTMEEProbe_IDGeneAccEntrezOo1_xFoldOo1_pValOo1_FlagOo2_xFoldOo2_pValOo2_Flag
0022693
(v1.0)		A_51_P437657Nsep1NM_01173222608
11P0.6280.135P
0022693
(v1.0)		A_52_P187132Nsep1NM_01173222608
11P0.9650.783P
0022693
(v1.0)		A_52_P363833Nsep1NM_01173222608
11P0.8660.386P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0022693
(v1.0)		Ybx122608
9701831100