DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2001121
Gene4931406P16Rik
Synonyms
DescriptionRIKEN cDNA 4931406P16 gene
LocusNM_172741 UCSC: chr7:35021733-35070628(-) OLP: chr7:35021733-35070628(-)
DB links


Entrez 233103
MGI 1924311
Ensembl ENSMUSG00000066571
Vega OTTMUSG00000008390
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
0.786
SPR
1.705
Oo
2.147
1C
1.813
2C
1.394
4C
1
ESC
0.865
MEF
2.26
p1C
1.427
p4C
1.025
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2001121
(v2.0)		4931406P16RikNM_172741233103
5.1066749.6521139.42963.972523.7849.007686.32154180.94325.72599.58083
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.011
H3.3
Rep.1
0.14
H3.3
Rep.2
-2.127
H3K4me3
Rep.1
-2.466
H3K4me3
Rep.2
-2.199
H3K27me3
Rep.1
-2.778
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2001121
(v2.0)		4931406P16Rik233103
516/3590.0105429/3590.14046/359-2.127425/359-2.466218/359-2.198878/359-2.778
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.136
H3.3
Rep.1
0.26
H3.3
Rep.2
-1.619
H3K4me3
Rep.1
-2.471
H3K4me3
Rep.2
-2.498
H3K27me3
Rep.1
-2.874
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2001121
(v2.0)		4931406P16Rik233103
215/1370.1364178/1370.25983/137-1.61949/137-2.47115/137-2.498527/137-2.8742
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2001121
(v2.0)		4931406P16Rik233103
57.18526390.77
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2001121
(v2.0)		4931406P16Rik233103
26.17852990.27
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A