DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2001419
Gene9130011E15Rik
Synonyms
DescriptionRIKEN cDNA 9130011E15 gene
LocusNM_198296 UCSC: chr19:45892634-46072978(-) OLP: chr19:45892634-46072978(-)
DB links


Entrez 71617
MGI 1918867
Ensembl ENSMUSG00000039901
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
0.807
SPR
1.392
Oo
1.281
1C
1.209
2C
1.008
4C
0.524
ESC
0.863
MEF
1.261
p1C
1.086
p4C
0.525
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2001419
(v2.0)		9130011E15RikNM_19829671617
5.4064623.68318.08215.16489.183982.34246.297217.234911.19232.34984
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.385
H3.3
Rep.1
-0.048
H3.3
Rep.2
1.853
H3K4me3
Rep.1
1.198
H3K4me3
Rep.2
0.468
H3K27me3
Rep.1
0.169
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2001419
(v2.0)		9130011E15Rik71617
660/3540.3849371/354-0.0484108/3541.853324/3541.1978118/3540.4681603/3540.1686
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.38
H3.3
Rep.1
-0.056
H3.3
Rep.2
2.6
H3K4me3
Rep.1
1.603
H3K4me3
Rep.2
-1.248
H3K27me3
Rep.1
-0.703
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2001419
(v2.0)		9130011E15Rik71617
305/1640.3803171/164-0.055687/1642.6200/1641.602816/164-1.2485152/164-0.7034
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2001419
(v2.0)		9130011E15Rik71617
66.757315443.35
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2001419
(v2.0)		9130011E15Rik71617
17.14318021.43
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0001535
(v1.0)		11248H3110E06-39130011E15Rik71617
U039099NAP007425-001TC9320493.33043.33243.34663.25092.8213.0842.9713
0001535
(v1.0)		18607L0217C04-3Mm.242849130011E15Rik71617
U039099NAP007425-001TC9320493.80843.68033.32263.49363.43463.42173.374
MOE430 N/A
Agilent44K N/A
Proteome N/A