DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2001655
GeneAA792892
Synonyms
Descriptionexpressed sequence AA792892
LocusNM_178894 UCSC: chr5:94806365-94813359(+) OLP: chr5:94806365-94813359(+)
DB links


Entrez 100554
MGI 2140789
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
0
SPR
2.516
Oo
2.585
1C
1.452
2C
1.453
4C
0.544
ESC
0.015
MEF
2.619
p1C
1.652
p4C
1.183
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2001655
(v2.0)		AA792892NM_178894100554
0327.147383.64927.289327.38122.501680.0359971414.71143.828814.2418
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.29
H3.3
Rep.1
1.603
H3.3
Rep.2
-1.05
H3K4me3
Rep.1
0.835
H3K4me3
Rep.2
-2.043
H3K27me3
Rep.1
-1.943
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2001655
(v2.0)		AA792892100554
23/130.290245/131.60260/13-1.050510/130.8350/13-2.04354/13-1.9433
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
-0.083
H3.3
Rep.1
0.547
H3.3
Rep.2
-0.58
H3K4me3
Rep.1
0.241
H3K4me3
Rep.2
-1.288
H3K27me3
Rep.1
-1.593
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2001655
(v2.0)		AA792892100554
8/6-0.083410/60.54680/6-0.57963/60.24110/6-1.28752/6-1.5932
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2001655
(v2.0)		AA792892100554
6.1774877.22
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2001655
(v2.0)		AA792892100554
3.3857484.64
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A