DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:2001716

Gene

AU022751

Synonyms

Description

expressed sequence AU022751

Locus

NM_001166433 UCSC: chrX:5658336-5660538(-) OLP: chrX:5658336-5660538(-)
NM_001033211 UCSC: chrX:5658336-5660538(-) OLP: chrX:5658336-5660538(-)

DB links

Entrez 102991
MGI 2147968
Ensembl ENSMUSG00000073294
Vega OTTMUSG00000016674

Feature

protein-coding

GO_BP

GO_MF

GO_CC

KEGG

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	ESC_FPKM	MEF_FPKM	p1C_FPKM	p4C_FPKM	iPSC_FPKM
2001716 (v2.0)	AU022751	NM_001033211,NM_001166433	102991	0.243647	751.76	1481.99	52.9556	17.2485	1.549	0.168589	1728.24	36.1057	2.17099

SPR_Histone_Erkek_5KaroundTSS

DBTMEE	Gene	Entrez	H3.3_1_ChIP/Input	H3.3_1(Enrich; log2)	H3.3_2_ChIP/Input	H3.3_2(Enrich; log2)	H3K4me3_1_ChIP/Input	H3K4me3_1(Enrich; log2)	H3K4me3_2_ChIP/Input	H3K4me3_2(Enrich; log2)	H3K27me3_1_ChIP/Input	H3K27me3_1(Enrich; log2)	H3K27me3_2_ChIP/Input	H3K27me3_2(Enrich; log2)
2001716 (v2.0)	AU022751	102991	443/181	0.7752	316/181	0.6847	124/181	2.9734	342/181	2.2336	28/181	-0.6169	169/181	-0.6934

SPR_Histone_Erkek_2KaroundTSS

DBTMEE	Gene	Entrez	H3.3_1_ChIP/Input	H3.3_1(Enrich; log2)	H3.3_2_ChIP/Input	H3.3_2(Enrich; log2)	H3K4me3_1_ChIP/Input	H3K4me3_1(Enrich; log2)	H3K4me3_2_ChIP/Input	H3K4me3_2(Enrich; log2)	H3K27me3_1_ChIP/Input	H3K27me3_1(Enrich; log2)	H3K27me3_2_ChIP/Input	H3K27me3_2(Enrich; log2)
2001716 (v2.0)	AU022751	102991	288/87	1.2048	174/87	0.8763	121/87	3.9005	306/87	3.1093	6/87	-1.6452	62/87	-1.0698

SPR_Methy_Kobayashi_5KaroundTSS

DBTMEE	Gene	Entrez	Total_mC_levels	Number_of_mCs	Averaged_Methylation_level
2001716 (v2.0)	AU022751	102991	37.6623	101	37.29

SPR_Methy_Kobayashi_2KaroundTSS

DBTMEE	Gene	Entrez	Total_mC_levels	Number_of_mCs	Averaged_Methylation_level
2001716 (v2.0)	AU022751	102991	17.7493	80	22.19

SOLiD_OocyteTo4C_FPKM_gene_guided

N/A

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

N/A

SOLiD_Partheno1C_FPKM_gene_guided

N/A

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

N/A

SOLiD_Partheno4C_FPKM_gene_guided

N/A

Illumina_Oo_2C_FPKM_gene_guided

N/A

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

N/A

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0001836 (v1.0)	9840	H3087B01-3		AU022751	102991	U039251	NAP004651-001		TC874977		U,F,2	4.3171	4.6945	4.6558	3.809	3.5888	3.5473	3.4212
0001836 (v1.0)	15547	K0203D03-3	Mm.27729	AU022751	102991							4.1783	4.4734	4.3359	3.2585	3.1482	3.1144	2.9582

N/A

N/A

N/A