DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2002533
GeneAp3s1
Synonyms[s]3A
Descriptionadaptor-related protein complex 3, sigma 1 subunit
LocusNM_009681 UCSC: chr18:46901571-46950480(+) OLP: chr18:46901571-46950480(+)
DB links


Entrez 11777
MGI 1337062
Ensembl ENSMUSG00000024480
Featureprotein-coding
GO_BP
GO_MF
  •   1 Terms
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.933
SPR
0.842
Oo
1.108
1C
0.962
2C
0.769
4C
1.514
ESC
0.95
MEF
0.966
p1C
0.756
p4C
1.544
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002533
(v2.0)		Ap3s1NM_00968111777
84.78155.9573411.80958.166044.8698531.63177.908238.252224.7006933.9729
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.419
H3.3
Rep.1
0.274
H3.3
Rep.2
3.312
H3K4me3
Rep.1
2.486
H3K4me3
Rep.2
-0.123
H3K27me3
Rep.1
-0.726
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2002533
(v2.0)		Ap3s111777
693/3630.4191476/3630.2741306/3633.3119813/3632.486480/363-0.1226332/363-0.7255
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.726
H3.3
Rep.1
0.362
H3.3
Rep.2
4.335
H3K4me3
Rep.1
3.543
H3K4me3
Rep.2
0.13
H3K27me3
Rep.1
-0.665
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2002533
(v2.0)		Ap3s111777
395/1670.7258233/1670.3624297/1674.3353784/1673.542644/1670.1304159/167-0.6651
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2002533
(v2.0)		Ap3s111777
66.587315144.1
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2002533
(v2.0)		Ap3s111777
16.1019816.43
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002644
(v1.0)		9395H3080E11-3Mm.27171Ap3s111777
U018701NAP093738-001Ap3s1;TC826037O88670U,F,23.38413.38793.10643.24962.91932.8712.9928
MOE430 N/A
Agilent44K N/A
Proteome N/A