DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2002758
GeneArmc1
SynonymsArcp
Descriptionarmadillo repeat containing 1
LocusNM_028840 UCSC: chr3:19032144-19063065(-) OLP: chr3:19032144-19063065(-)
DB links


Entrez 74252
MGI 1921502
Ensembl ENSMUSG00000027599
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.014
SPR
1.49
Oo
1.553
1C
1.499
2C
1.465
4C
1.414
ESC
1.395
MEF
1.379
p1C
1.445
p4C
1.454
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002758
(v2.0)		Armc1NM_02884074252
9.3216629.895734.711430.528428.145324.920623.824722.908126.884527.4391
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.023
H3.3
Rep.1
0.048
H3.3
Rep.2
1.41
H3K4me3
Rep.1
0.529
H3K4me3
Rep.2
-1.181
H3K27me3
Rep.1
-1.302
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2002758
(v2.0)		Armc174252
651/4490.0231503/4490.0475100/4491.4102258/4490.529547/449-1.1811275/449-1.3019
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.063
H3.3
Rep.1
0.096
H3.3
Rep.2
2.342
H3K4me3
Rep.1
1.532
H3K4me3
Rep.2
-2.212
H3K27me3
Rep.1
-2.677
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2002758
(v2.0)		Armc174252
310/2080.0626241/2080.095891/2082.3424241/2081.532410/208-2.211848/208-2.6769
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2002758
(v2.0)		Armc174252
47.132412836.82
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2002758
(v2.0)		Armc174252
10.98579012.21
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A