DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2002775
GeneArnt
SynonymsbHLHe2
D3Ertd557e
ESTM42
Hif1b
Descriptionaryl hydrocarbon receptor nuclear translocator
LocusNM_009709 UCSC: chr3:95238312-95301161(+) OLP: chr3:95238312-95301161(+)
NM_001037737 UCSC: chr3:95238312-95301161(+) OLP: chr3:95238312-95301161(+)
DB links


Entrez 11863
MGI 88071
Ensembl ENSMUSG00000015522
Vega OTTMUSG00000016472
Featureprotein-coding
GO_BP
  •   15 Terms
      response to hypoxia (GO:0001666)
      embryonic placenta development (GO:0001892)
      transcription, DNA-templated (GO:0006351)
      regulation of transcription, DNA-templated (GO:0006355)
      signal transduction (GO:0007165)
      response to toxic substance (GO:0009636)
      positive regulation vascular endothelial growth factor production (GO:0010575)
      cell differentiation (GO:0030154)
      intracellular receptor signaling pathway (GO:0030522)
      positive regulation of protein sumoylation (GO:0033235)
      regulation of transcription from RNA polymerase II promoter in response to oxidative stress (GO:0043619)
      positive regulation of transcription, DNA-templated (GO:0045893)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      positive regulation of hormone biosynthetic process (GO:0046886)
      regulation of RNA biosynthetic process (GO:2001141)
GO_MF
  •   14 Terms
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
0.976
SPR
1.403
Oo
1.62
1C
1.411
2C
1.245
4C
1.321
ESC
1.121
MEF
1.627
p1C
1.198
p4C
1.288
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002775
(v2.0)		ArntNM_001037737,NM_00970911863
8.4700224.314140.661124.752916.57119.949612.203741.323914.777918.4178
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.266
H3.3
Rep.1
0.116
H3.3
Rep.2
1.956
H3K4me3
Rep.1
1.226
H3K4me3
Rep.2
0.022
H3K27me3
Rep.1
-0.434
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2002775
(v2.0)		Arnt11863
570/3320.2662390/3320.1158109/3321.9556310/3321.226181/3320.0223372/332-0.4337
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.404
H3.3
Rep.1
0.105
H3.3
Rep.2
2.922
H3K4me3
Rep.1
2.218
H3K4me3
Rep.2
-1.806
H3K27me3
Rep.1
-1.2
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2002775
(v2.0)		Arnt11863
295/1560.4041182/1560.1055104/1562.9218292/1562.217610/156-1.8062102/156-1.2003
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2002775
(v2.0)		Arnt11863
42.95698948.27
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2002775
(v2.0)		Arnt11863
15.18375826.18
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002879
(v1.0)		10161H3091H09-3Mm.4316Arnt11863
U003569NAP107202-1Arnt;TC887829P53762U,F,22.77862.85412.98782.94043.1352.93833.0769
0002879
(v1.0)		14160J0419D03-3Mm.206804Arnt11863
U003569NAP001806-001Arnt;TC887828P53762U,F,23.33563.38252.81912.8312.61282.67082.6909
MOE430 N/A
Agilent44K N/A
Proteome N/A