DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2003032
GeneAtxn3
Synonymsataxin-3
Atx3
Mjd
MJD1
Sca3
Descriptionataxin 3
LocusNM_029705 UCSC: chr12:103157111-103196453(-) OLP: chr12:103157111-103196453(-)
NM_001167914 UCSC: chr12:103171134-103196453(-) OLP: chr12:103171134-103196453(-)
DB links


Entrez 110616
MGI 1099442
Ensembl ENSMUSG00000021189
Vega OTTMUSG00000030696
Featureprotein-coding
GO_BP
  •   16 Terms
      microtubule cytoskeleton organization (GO:0000226)
      transcription, DNA-templated (GO:0006351)
      regulation of transcription, DNA-templated (GO:0006355)
      proteolysis (GO:0006508)
      ubiquitin-dependent protein catabolic process (GO:0006511)
      misfolded or incompletely synthesized protein catabolic process (GO:0006515)
      regulation of cell-substrate adhesion (GO:0010810)
      actin cytoskeleton organization (GO:0030036)
      cellular response to heat (GO:0034605)
      monoubiquitinated protein deubiquitination (GO:0035520)
      exploration behavior (GO:0035640)
      proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161)
      intermediate filament cytoskeleton organization (GO:0045104)
      protein K63-linked deubiquitination (GO:0070536)
      protein K48-linked deubiquitination (GO:0071108)
      cellular response to misfolded protein (GO:0071218)
GO_MF
GO_CC
KEGG
  •   1 Terms
      Protein processing in endoplasmic reticulum (mmu04141)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003032
(v2.0)		Atxn3NM_001167914,NM_029705110616
37.51346.8699416.96151.400259.957411.93695.5144717.411560.97319.56617
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2003032
(v2.0)		Atxn3110616
698/3500.4819498/3500.39161017/3505.09223249/3504.53627/350-1.6031230/350-1.1997
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2003032
(v2.0)		Atxn3110616
369/1450.8304263/1450.7388810/1455.96882203/1455.23258/145-1.99372/145-1.5892
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2003032
(v2.0)		Atxn3110616
37.582811034.17
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2003032
(v2.0)		Atxn3110616
11.30958014.14
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A