DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2003475
GeneBrd3
SynonymsFsrg2
ORFX
RINGL3
Descriptionbromodomain containing 3
LocusNM_001113574 UCSC: chr2:27301101-27331193(-) OLP: chr2:27301101-27331193(-)
NM_001113573 UCSC: chr2:27301101-27331193(-) OLP: chr2:27301101-27331193(-)
NM_023336 UCSC: chr2:27301101-27330918(-) OLP: chr2:27301101-27330918(-)
DB links


Entrez 67382
MGI 1914632
Ensembl ENSMUSG00000026918
Vega OTTMUSG00000012035
Featureprotein-coding
GO_BP
  •   4 Terms
      transcription, DNA-templated (GO:0006351)
      regulation of transcription, DNA-templated (GO:0006355)
      regulation of transcription from RNA polymerase II promoter (GO:0006357)
      chromatin modification (GO:0016568)
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003475
(v2.0)		Brd3NM_001113573,NM_001113574,NM_023336,NR_10610267382
10.77764.480935.2788241.695929.250814.230822.84399.440423.624612.4926
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2003475
(v2.0)		Brd367382
726/534-0.0696420/534-0.4616451/5343.32811090/5342.355243/534-1.5547278/534-1.536
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2003475
(v2.0)		Brd367382
389/1810.5883211/1810.1045428/1814.75241025/1813.814316/181-1.3874108/181-1.3322
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2003475
(v2.0)		Brd367382
49.017914733.35
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2003475
(v2.0)		Brd367382
9.85881069.3
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003593
(v1.0)		15041J1012G09-3Mm.28721Brd367382
3.63823.90884.21673.92213.57173.81883.6026
MOE430 N/A
Agilent44K N/A
Proteome N/A