DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2003795
GeneCapns1
SynonymsCapa-4
Capa4
Capn4
D7Ertd146e
Descriptioncalpain, small subunit 1
LocusNM_009795 UCSC: chr7:30971961-30980067(-) OLP: chr7:30971961-30980067(-)
DB links


Entrez 12336
MGI 88266
Ensembl ENSMUSG00000001794
Vega OTTMUSG00000022203
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003795
(v2.0)		Capns1NM_00979512336
309.27236.044833.78234.2837910.3402453.061117.60543.775710.6287474.136
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2003795
(v2.0)		Capns112336
726/533-0.0669399/533-0.5327126/5331.4993373/5330.8134138/5330.1075844/5330.0636
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2003795
(v2.0)		Capns112336
306/219-0.0301171/219-0.470692/2192.2876267/2191.606157/2190.1138342/2190.0435
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2003795
(v2.0)		Capns112336
63.421619732.19
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2003795
(v2.0)		Capns112336
24.73759127.18
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003905
(v1.0)		19576L0282E05-3Mm.6534Capns112336
U028370NAP098407-001Capns1;TC886353,TC886351O88456U2.97243.05863.11813.04063.0913.12323.1658
MOE430 N/A
Agilent44K N/A
Proteome N/A