DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2003797
GeneCaprin1
Synonymscaprin-1
Gpiap1
MMGPIP137
RNG105
Descriptioncell cycle associated protein 1
LocusNM_001111289 UCSC: chr2:103603102-103637235(-) OLP: chr2:103603102-103637235(-)
NM_001111290 UCSC: chr2:103603102-103637235(-) OLP: chr2:103603102-103637235(-)
NM_016739 UCSC: chr2:103603102-103637797(-) OLP: chr2:103603102-103637797(-)
NM_001111292 UCSC: chr2:103607264-103637235(-) OLP: chr2:103607264-103637235(-)
NM_001111291 UCSC: chr2:103607264-103637797(-) OLP: chr2:103607264-103637797(-)
DB links


Entrez 53872
MGI 1858234
Ensembl ENSMUSG00000027184
Vega OTTMUSG00000014878
Featureprotein-coding
GO_BP
  •   4 Terms
      negative regulation of translation (GO:0017148)
      cell differentiation (GO:0030154)
      positive regulation of dendrite morphogenesis (GO:0050775)
      positive regulation of dendritic spine morphogenesis (GO:0061003)
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.73
SPR
1.404
Oo
1.681
1C
1.873
2C
2.196
4C
2.06
ESC
1.841
MEF
1.693
p1C
2.077
p4C
2.068
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003797
(v2.0)		Caprin1NM_001111289,NM_001111290,NM_001111291,NM_001111292,NM_01673953872
52.660624.37147.013273.6054156.011113.91568.420848.3536118.398115.91
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.573
H3.3
Rep.1
0.425
H3.3
Rep.2
4.45
H3K4me3
Rep.1
3.77
H3K4me3
Rep.2
-1.692
H3K27me3
Rep.1
-1.316
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2003797
(v2.0)		Caprin153872
820/3860.573562/3860.4248716/3864.44982106/3863.770428/386-1.6922234/386-1.3159
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
1.049
H3.3
Rep.1
0.558
H3.3
Rep.2
5.468
H3K4me3
Rep.1
4.632
H3K4me3
Rep.2
-2.467
H3K27me3
Rep.1
-1.805
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2003797
(v2.0)		Caprin153872
465/1571.0489251/1570.5578616/1575.46821571/1574.63216/157-2.467267/157-1.8048
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2003797
(v2.0)		Caprin153872
38.217814226.91
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2003797
(v2.0)		Caprin153872
10.50361139.3
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A