DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2004002
GeneCcdc50
SynonymsD16Bwg1543e
Descriptioncoiled-coil domain containing 50
LocusNM_001025615 UCSC: chr16:27389042-27452304(+) OLP: chr16:27389042-27452304(+)
NM_001289436 UCSC: chr16:27389042-27452304(+) OLP: chr16:27389042-27452304(+)
NM_026202 UCSC: chr16:27389042-27452304(+) OLP: chr16:27389042-27452304(+)
DB links


Entrez 67501
MGI 1914751
Ensembl ENSMUSG00000038127
Vega OTTMUSG00000023490
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004002
(v2.0)		Ccdc50NM_001025615,NM_001289436,NM_02620267501
14.830514.836130.466612.61835.692749.2043423.512523.82415.918158.81107
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2004002
(v2.0)		Ccdc5067501
651/3690.3055462/3690.2075160/3692.3578482/3691.709929/369-1.579208/369-1.4198
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2004002
(v2.0)		Ccdc5067501
306/1410.6015175/1410.1942150/1413.5808388/1412.76989/141-1.801881/141-1.3825
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2004002
(v2.0)		Ccdc5067501
38.17847749.58
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2004002
(v2.0)		Ccdc5067501
12.28434726.14
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A