DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2004110
GeneCcnt1
SynonymsCycT1
Descriptioncyclin T1
LocusNM_009833 UCSC: chr15:98373642-98398067(-) OLP: chr15:98373642-98398067(-)
DB links


Entrez 12455
MGI 1328363
Ensembl ENSMUSG00000011960
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
0.814
SPR
1.144
Oo
1.172
1C
1.7
2C
1.722
4C
0.861
ESC
1.384
MEF
1.181
p1C
1.656
p4C
0.734
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004110
(v2.0)		Ccnt1NM_00983312455
5.5117812.94513.850249.111351.75676.2611823.198814.165644.3374.42353
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.237
H3.3
Rep.1
0.056
H3.3
Rep.2
2.964
H3K4me3
Rep.1
2.001
H3K4me3
Rep.2
-1.219
H3K27me3
Rep.1
-1.157
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2004110
(v2.0)		Ccnt112455
678/4030.2371454/4030.0556266/4032.9643644/4032.000841/403-1.2194273/403-1.1568
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.39
H3.3
Rep.1
-0.172
H3.3
Rep.2
3.922
H3K4me3
Rep.1
2.699
H3K4me3
Rep.2
-2.467
H3K27me3
Rep.1
-2.133
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2004110
(v2.0)		Ccnt112455
337/1800.39173/180-0.1724239/1803.922470/1802.6997/180-2.467161/180-2.1331
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2004110
(v2.0)		Ccnt112455
53.892719128.22
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2004110
(v2.0)		Ccnt112455
18.241413113.92
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A