DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2004143
GeneCcz1
Synonyms
DescriptionCCZ1 vacuolar protein trafficking and biogenesis associated
LocusNM_177682 UCSC: chr5:144748778-144775722(-) OLP: chr5:144748778-144775722(-)
DB links


Entrez 231874
MGI 2141070
Ensembl ENSMUSG00000029617
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.488
SPR
1.474
Oo
1.88
1C
1.751
2C
1.825
4C
1.151
ESC
1.694
MEF
1.797
p1C
1.771
p4C
1.115
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004143
(v2.0)		Ccz1NM_177682231874
29.735428.755574.912255.363565.781313.152948.454761.663657.957812.0222
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.181
H3.3
Rep.1
0.108
H3.3
Rep.2
1.528
H3K4me3
Rep.1
0.895
H3K4me3
Rep.2
-0.224
H3K27me3
Rep.1
-0.15
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2004143
(v2.0)		Ccz1231874
607/3750.1815438/3750.107691/3751.5279278/3750.89577/375-0.2235512/375-0.1497
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.37
H3.3
Rep.1
0.104
H3.3
Rep.2
2.575
H3K4me3
Rep.1
1.921
H3K4me3
Rep.2
-2.005
H3K27me3
Rep.1
-0.907
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2004143
(v2.0)		Ccz1231874
301/1630.3701190/1630.104385/1632.575248/1631.92059/163-2.0054131/163-0.9069
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2004143
(v2.0)		Ccz1231874
87.07111774.42
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2004143
(v2.0)		Ccz1231874
19.97224643.42
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A