DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2004420
GeneCenpf
SynonymsLek1
mitosin
Descriptioncentromere protein F
LocusNM_001081363 UCSC: chr1:191464493-191511965(-) OLP: chr1:191464493-191511965(-)
DB links


Entrez 108000
MGI 1313302
Ensembl ENSMUSG00000026605
Vega OTTMUSG00000035168
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
0.284
SPR
1.909
Oo
1.862
1C
1.521
2C
1.126
4C
1.395
ESC
1.253
MEF
1.643
p1C
1.16
p4C
1.372
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004420
(v2.0)		CenpfNM_001081363108000
0.92254280.097171.82832.168612.379923.832716.902542.985613.463322.5709
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.339
H3.3
Rep.1
0.181
H3.3
Rep.2
3.219
H3K4me3
Rep.1
2.576
H3K4me3
Rep.2
-0.324
H3K27me3
Rep.1
-0.236
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2004420
(v2.0)		Cenpf108000
670/3710.3391456/3710.181293/3713.219884/3712.575871/371-0.3237477/371-0.2361
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.729
H3.3
Rep.1
0.337
H3.3
Rep.2
4.386
H3K4me3
Rep.1
3.724
H3K4me3
Rep.2
-0.412
H3K27me3
Rep.1
-0.744
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2004420
(v2.0)		Cenpf108000
358/1510.7288207/1510.3369280/1514.3856805/1513.723727/151-0.4125136/151-0.7438
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2004420
(v2.0)		Cenpf108000
63.82713547.28
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2004420
(v2.0)		Cenpf108000
15.2248418.12
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A