DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2004641
GeneCib1
SynonymsKip
Descriptioncalcium and integrin binding 1 (calmyrin)
LocusNM_001291275 UCSC: chr7:87372042-87377691(-) OLP: chr7:87372042-87377691(-)
NM_001291276 UCSC: chr7:87372042-87377691(-) OLP: chr7:87372042-87377691(-)
NM_011870 UCSC: chr7:87372042-87377691(-) OLP: chr7:87372042-87377691(-)
DB links


Entrez 23991
MGI 1344418
Ensembl ENSMUSG00000030538
Vega OTTMUSG00000022916
Featureprotein-coding
GO_BP
  •   44 Terms
      angiogenesis (GO:0001525)
      negative regulation of protein phosphorylation (GO:0001933)
      positive regulation of protein phosphorylation (GO:0001934)
      positive regulation of cell-matrix adhesion (GO:0001954)
      response to ischemia (GO:0002931)
      apoptotic process (GO:0006915)
      cellular response to DNA damage stimulus (GO:0006974)
      negative regulation of microtubule depolymerization (GO:0007026)
      cell cycle (GO:0007049)
      endomitotic cell cycle (GO:0007113)
      cell adhesion (GO:0007155)
      integrin-mediated signaling pathway (GO:0007229)
      spermatogenesis (GO:0007283)
      spermatid development (GO:0007286)
      positive regulation of cell proliferation (GO:0008284)
      negative regulation of cell proliferation (GO:0008285)
      negative regulation of neuron projection development (GO:0010977)
      cell differentiation (GO:0030154)
      platelet formation (GO:0030220)
      positive regulation of cell growth (GO:0030307)
      positive regulation of cell migration (GO:0030335)
      cytoplasmic microtubule organization (GO:0031122)
      positive regulation of cell adhesion mediated by integrin (GO:0033630)
      thrombopoietin-mediated signaling pathway (GO:0038163)
      regulation of cell proliferation (GO:0042127)
      negative regulation of apoptotic process (GO:0043066)
      negative regulation of megakaryocyte differentiation (GO:0045653)
      positive regulation of metalloenzyme activity (GO:0048554)
      positive regulation of NF-kappaB transcription factor activity (GO:0051092)
      cell division (GO:0051301)
      regulation of cell division (GO:0051302)
      negative regulation of protein kinase B signaling (GO:0051898)
      positive regulation of ERK1 and ERK2 cascade (GO:0070374)
      positive regulation of calcineurin-NFAT signaling cascade (GO:0070886)
      cellular response to tumor necrosis factor (GO:0071356)
      cellular response to growth factor stimulus (GO:0071363)
      positive regulation of protein serine/threonine kinase activity (GO:0071902)
      positive regulation of establishment of protein localization to plasma membrane (GO:0090004)
      positive regulation of cell migration involved in sprouting angiogenesis (GO:0090050)
      positive regulation of protein targeting to membrane (GO:0090314)
      positive regulation of substrate adhesion-dependent cell spreading (GO:1900026)
      positive regulation of gene expression involved in extracellular matrix organization (GO:1901313)
      cellular response to nerve growth factor stimulus (GO:1990090)
      positive regulation of male germ cell proliferation (GO:2000256)
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004641
(v2.0)		Cib1NM_001291275,NM_001291276,NM_01187023991
311.33272.0319134.68734.101638.048367.787425.779674.923836.364270.7563
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2004641
(v2.0)		Cib123991
740/4900.0818400/490-0.408157/4901.9329510/4901.384418/490-2.6431152/490-2.2767
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2004641
(v2.0)		Cib123991
332/1740.4172171/174-0.1404122/1743.0034368/1742.39515/174-2.834352/174-2.3087
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2004641
(v2.0)		Cib123991
75.187214252.95
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2004641
(v2.0)		Cib123991
22.45278626.11
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004724
(v1.0)		13819J0208D02-3Mm.30217Cib123991
Cib13.2493.28762.9012.8952.59182.83452.7303
MOE430 N/A
Agilent44K N/A
Proteome N/A