DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2004799
GeneCltc
SynonymsCHC
Descriptionclathrin, heavy polypeptide (Hc)
LocusNM_001003908 UCSC: chr11:86508155-86570994(-) OLP: chr11:86508155-86570994(-)
DB links


Entrez 67300
MGI 2388633
Ensembl ENSMUSG00000047126
Vega OTTMUSG00000001209
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
  •   5 Terms
Ver2_FPKM
Log10 (FPKM+1)
1.872
SPR
1.992
Oo
2.027
1C
1.794
2C
1.824
4C
1.815
ESC
2.207
MEF
1.854
p1C
1.791
p4C
1.74
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004799
(v2.0)		CltcNM_00100390867300
73.392997.2265105.41461.25465.700464.3634159.97870.449160.843553.9035
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.257
H3.3
Rep.1
0.142
H3.3
Rep.2
4.139
H3K4me3
Rep.1
3.435
H3K4me3
Rep.2
-1.698
H3K27me3
Rep.1
-1.599
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2004799
(v2.0)		Cltc67300
730/4280.2569512/4280.142638/4284.13891850/4283.435431/428-1.6976213/428-1.5992
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.5
H3.3
Rep.1
0.07
H3.3
Rep.2
5.101
H3K4me3
Rep.1
4.135
H3K4me3
Rep.2
-3.258
H3K27me3
Rep.1
-2.472
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2004799
(v2.0)		Cltc67300
394/1950.4997222/1950.0705585/1955.10141378/1954.13494/195-3.258152/195-2.4722
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2004799
(v2.0)		Cltc67300
32.791514922.01
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2004799
(v2.0)		Cltc67300
7.16961215.93
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004877
(v1.0)		5986H3014D01-3Mm.200876Cltc67300
U033227NAP004156-002Cltc;TC813868,TC813867U,F,22.94023.07873.08872.85692.95882.95073.1539
MOE430 N/A
Agilent44K N/A
Proteome N/A