DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2005201
GeneCsk
Synonyms
Descriptionc-src tyrosine kinase
LocusNM_007783 UCSC: chr9:57474453-57492987(-) OLP: chr9:57474453-57492987(-)
DB links


Entrez 12988
MGI 88537
Ensembl ENSMUSG00000032312
Featureprotein-coding
GO_BP
  •   18 Terms
      immune system process (GO:0002376)
      protein phosphorylation (GO:0006468)
      negative regulation of cell proliferation (GO:0008285)
      negative regulation of low-density lipoprotein particle clearance (GO:0010989)
      phosphorylation (GO:0016310)
      peptidyl-tyrosine phosphorylation (GO:0018108)
      negative regulation of interleukin-6 production (GO:0032715)
      negative regulation of kinase activity (GO:0033673)
      intracellular signal transduction (GO:0035556)
      negative regulation of Golgi to plasma membrane protein transport (GO:0042997)
      positive regulation of MAP kinase activity (GO:0043406)
      negative regulation of bone resorption (GO:0045779)
      protein autophosphorylation (GO:0046777)
      negative regulation of phagocytosis (GO:0050765)
      regulation of T cell activation (GO:0050863)
      regulation of Fc receptor mediated stimulatory signaling pathway (GO:0060368)
      negative regulation of ERK1 and ERK2 cascade (GO:0070373)
      cellular response to peptide hormone stimulus (GO:0071375)
GO_MF
GO_CC
KEGG
  •   3 Terms
      Chemokine signaling pathway (mmu04062)
      Neurotrophin signaling pathway (mmu04722)
      Regulation of actin cytoskeleton (mmu04810)
Ver2_FPKM
Log10 (FPKM+1)
1.657
SPR
1.411
Oo
1.498
1C
0.968
2C
1.13
4C
1.201
ESC
0.795
MEF
1.598
p1C
1.039
p4C
1.215
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2005201
(v2.0)		CskNM_00778312988
44.399624.735830.47358.2852312.477314.87955.2334338.58439.9486915.3937
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
-0.009
H3.3
Rep.1
-0.671
H3.3
Rep.2
2.131
H3K4me3
Rep.1
1.312
H3K4me3
Rep.2
-2.341
H3K27me3
Rep.1
-1.794
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2005201
(v2.0)		Csk12988
682/481-0.0091327/481-0.6712177/4812.131476/4811.311722/481-2.341209/481-1.7945
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.266
H3.3
Rep.1
-0.372
H3.3
Rep.2
3.218
H3K4me3
Rep.1
2.265
H3K4me3
Rep.2
-2.443
H3K27me3
Rep.1
-1.544
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2005201
(v2.0)		Csk12988
304/1770.2661148/177-0.372144/1773.2177342/1772.26547/177-2.443491/177-1.5435
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2005201
(v2.0)		Csk12988
90.94312572.75
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2005201
(v2.0)		Csk12988
34.26586651.92
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0005267
(v1.0)		18555L0214D12-3Mm.21974Csk12988
Csk3.06262.83713.07642.9673.00843.05162.9795
MOE430 N/A
Agilent44K N/A
Proteome N/A