DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2005317
GeneCttnbp2nl
Synonyms
DescriptionCTTNBP2 N-terminal like
LocusNM_001163333 UCSC: chr3:104804833-104855871(-) OLP: chr3:104804833-104855871(-)
NM_001163332 UCSC: chr3:104804833-104855871(-) OLP: chr3:104804833-104855871(-)
NM_030249 UCSC: chr3:104804833-104856064(-) OLP: chr3:104804833-104856064(-)
DB links


Entrez 80281
MGI 1933137
Ensembl ENSMUSG00000062127
Featureprotein-coding
GO_BP
  •   3 Terms
      protein dephosphorylation (GO:0006470)
      negative regulation of transporter activity (GO:0032410)
      negative regulation of transmembrane transport (GO:0034763)
GO_MF
  •   1 Terms
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.069
SPR
1.566
Oo
1.844
1C
1.437
2C
0.898
4C
0.76
ESC
0.802
MEF
1.856
p1C
0.978
p4C
0.77
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2005317
(v2.0)		Cttnbp2nlNM_001163332,NM_001163333,NM_03024980281
10.712235.804568.867926.38196.912954.754125.3438670.82738.512064.89411
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.013
H3.3
Rep.1
-0.192
H3.3
Rep.2
1.705
H3K4me3
Rep.1
0.688
H3K4me3
Rep.2
1.568
H3K27me3
Rep.1
1.475
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2005317
(v2.0)		Cttnbp2nl80281
615/4270.0135405/427-0.192117/4271.7052274/4270.688306/4271.56781801/4271.475
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.321
H3.3
Rep.1
0.021
H3.3
Rep.2
2.815
H3K4me3
Rep.1
1.712
H3K4me3
Rep.2
1.764
H3K27me3
Rep.1
1.667
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2005317
(v2.0)		Cttnbp2nl80281
323/1810.3211199/1810.0205111/1812.815238/1811.7124150/1811.7635874/1811.6668
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2005317
(v2.0)		Cttnbp2nl80281
66.523912851.97
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2005317
(v2.0)		Cttnbp2nl80281
11.83886917.16
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A